Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 RNA5SP402-201ENST00000517148 110 ntBASIC2.34□□□□□ -2.03
LCMT2O60294 MTCYBP20-201ENST00000524239 1129 ntBASIC2.34□□□□□ -2.03
LCMT2O60294 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.34□□□□□ -2.03
LCMT2O60294 AC021739.1-201ENST00000559631 174 ntBASIC2.34□□□□□ -2.03
LCMT2O60294 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.34□□□□□ -2.03
LCMT2O60294 NRBF2P1-201ENST00000587407 859 ntBASIC2.34□□□□□ -2.03
LCMT2O60294 AL391813.1-201ENST00000603098 260 ntBASIC2.34□□□□□ -2.03
LCMT2O60294 AC007621.1-201ENST00000604544 437 ntBASIC2.34□□□□□ -2.03
LCMT2O60294 AC007938.3-201ENST00000604965 623 ntBASIC2.34□□□□□ -2.03
LCMT2O60294 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.34□□□□□ -2.03
LCMT2O60294 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.34□□□□□ -2.03
LCMT2O60294 AC099842.1-201ENST00000619919 596 ntBASIC2.34□□□□□ -2.03
LCMT2O60294 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.34□□□□□ -2.03
LCMT2O60294 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
LCMT2O60294 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.34□□□□□ -2.03
LCMT2O60294 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.34□□□□□ -2.04
LCMT2O60294 AC093536.2-201ENST00000565257 1406 ntBASIC2.34□□□□□ -2.04
LCMT2O60294 NACAP2-201ENST00000318548 624 ntBASIC2.33□□□□□ -2.04
LCMT2O60294 RNU6-61P-201ENST00000365528 109 ntBASIC2.33□□□□□ -2.04
LCMT2O60294 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LCMT2O60294 AL162578.1-201ENST00000406202 378 ntBASIC2.33□□□□□ -2.04
LCMT2O60294 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.33□□□□□ -2.04
LCMT2O60294 AC007064.1-201ENST00000412238 351 ntBASIC2.33□□□□□ -2.04
LCMT2O60294 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LCMT2O60294 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.33□□□□□ -2.04
LCMT2O60294 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.33□□□□□ -2.04
LCMT2O60294 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.33□□□□□ -2.04
LCMT2O60294 RPS15AP9-201ENST00000439856 381 ntBASIC2.33□□□□□ -2.04
LCMT2O60294 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.33□□□□□ -2.04
LCMT2O60294 TPT1P7-201ENST00000458300 517 ntBASIC2.33□□□□□ -2.04
LCMT2O60294 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.33□□□□□ -2.04
LCMT2O60294 RBBP4P6-201ENST00000508098 202 ntBASIC2.33□□□□□ -2.04
LCMT2O60294 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.33□□□□□ -2.04
LCMT2O60294 AC117522.1-201ENST00000509821 380 ntBASIC2.33□□□□□ -2.04
LCMT2O60294 RNU6-123P-201ENST00000516163 102 ntBASIC2.33□□□□□ -2.04
LCMT2O60294 RNU6-143P-201ENST00000516942 93 ntBASIC2.33□□□□□ -2.04
LCMT2O60294 RNU6-430P-201ENST00000517078 107 ntBASIC2.33□□□□□ -2.04
LCMT2O60294 RNU1-104P-201ENST00000517280 175 ntBASIC2.33□□□□□ -2.04
LCMT2O60294 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.33□□□□□ -2.04
LCMT2O60294 AC098848.2-201ENST00000588023 330 ntBASIC2.33□□□□□ -2.04
LCMT2O60294 AC174048.1-201ENST00000603389 144 ntBASIC2.33□□□□□ -2.04
LCMT2O60294 AC245014.2-201ENST00000603689 287 ntBASIC2.33□□□□□ -2.04
LCMT2O60294 AL355598.1-201ENST00000604169 202 ntBASIC2.33□□□□□ -2.04
LCMT2O60294 AC246785.4-201ENST00000605374 287 ntBASIC2.33□□□□□ -2.04
LCMT2O60294 AL158032.1-201ENST00000605401 106 ntBASIC2.33□□□□□ -2.04
LCMT2O60294 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.33□□□□□ -2.04
LCMT2O60294 AC093648.1-201ENST00000623546 606 ntBASIC2.33□□□□□ -2.04
LCMT2O60294 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.33□□□□□ -2.04
LCMT2O60294 MTND4P35-201ENST00000604257 1375 ntBASIC2.33□□□□□ -2.04
LCMT2O60294 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
LCMT2O60294 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
LCMT2O60294 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
LCMT2O60294 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.32□□□□□ -2.04
LCMT2O60294 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
LCMT2O60294 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LCMT2O60294 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
LCMT2O60294 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.32□□□□□ -2.04
LCMT2O60294 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LCMT2O60294 Y_RNA.367-201ENST00000365544 101 ntBASIC2.32□□□□□ -2.04
LCMT2O60294 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.32□□□□□ -2.04
LCMT2O60294 Z98749.2-208ENST00000381646 500 ntBASIC2.32□□□□□ -2.04
LCMT2O60294 SNORA75B-201ENST00000384053 137 ntBASIC2.32□□□□□ -2.04
LCMT2O60294 RNU6-74P-201ENST00000384235 107 ntBASIC2.32□□□□□ -2.04
LCMT2O60294 CDK8P2-201ENST00000415020 547 ntBASIC2.32□□□□□ -2.04
LCMT2O60294 AL031779.1-201ENST00000415663 330 ntBASIC2.32□□□□□ -2.04
LCMT2O60294 AL591704.1-201ENST00000432574 275 ntBASIC2.32□□□□□ -2.04
LCMT2O60294 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.32□□□□□ -2.04
LCMT2O60294 HMGN2P10-201ENST00000448085 265 ntBASIC2.32□□□□□ -2.04
LCMT2O60294 MTND1P29-201ENST00000448112 647 ntBASIC2.32□□□□□ -2.04
LCMT2O60294 RPS27P27-201ENST00000498779 255 ntBASIC2.32□□□□□ -2.04
LCMT2O60294 RPL37P25-201ENST00000507308 276 ntBASIC2.32□□□□□ -2.04
LCMT2O60294 MTND4P2-201ENST00000507767 1203 ntBASIC2.32□□□□□ -2.04
LCMT2O60294 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.32□□□□□ -2.04
LCMT2O60294 AC026436.1-201ENST00000510537 270 ntBASIC2.32□□□□□ -2.04
LCMT2O60294 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.32□□□□□ -2.04
LCMT2O60294 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.32□□□□□ -2.04
LCMT2O60294 RNU6-1315P-201ENST00000517187 99 ntBASIC2.32□□□□□ -2.04
LCMT2O60294 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
LCMT2O60294 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.32□□□□□ -2.04
LCMT2O60294 AP001646.1-201ENST00000527936 915 ntBASIC2.32□□□□□ -2.04
LCMT2O60294 OR4R1P-201ENST00000529879 463 ntBASIC2.32□□□□□ -2.04
LCMT2O60294 AP002963.1-201ENST00000530590 184 ntBASIC2.32□□□□□ -2.04
LCMT2O60294 OR5BN1P-201ENST00000532955 829 ntBASIC2.32□□□□□ -2.04
LCMT2O60294 MIR4513-201ENST00000581077 86 ntBASIC2.32□□□□□ -2.04
LCMT2O60294 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.32□□□□□ -2.04
LCMT2O60294 AC008121.1-201ENST00000603244 268 ntBASIC2.32□□□□□ -2.04
LCMT2O60294 AL021997.1-201ENST00000605757 193 ntBASIC2.32□□□□□ -2.04
LCMT2O60294 AC126118.1-201ENST00000607744 628 ntBASIC2.32□□□□□ -2.04
LCMT2O60294 AC012409.4-201ENST00000612923 249 ntBASIC2.32□□□□□ -2.04
LCMT2O60294 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.32□□□□□ -2.04
LCMT2O60294 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.32□□□□□ -2.04
LCMT2O60294 AC103710.2-202ENST00000641454 2853 ntBASIC2.31□□□□□ -2.04
LCMT2O60294 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
LCMT2O60294 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.31□□□□□ -2.04
LCMT2O60294 CKAP2P1-201ENST00000555477 2049 ntBASIC2.31□□□□□ -2.04
LCMT2O60294 MIR21-201ENST00000362134 72 ntBASIC2.31□□□□□ -2.04
LCMT2O60294 RNU6-181P-201ENST00000363225 107 ntBASIC2.31□□□□□ -2.04
LCMT2O60294 SNORA67.1-201ENST00000364749 141 ntBASIC2.31□□□□□ -2.04
LCMT2O60294 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
LCMT2O60294 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms