Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 ATP1B3P1-201ENST00000605365 821 ntBASIC2.79□□□□□ -1.96
PRKNO60260 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.79□□□□□ -1.96
PRKNO60260 AC005858.4-201ENST00000623191 700 ntBASIC2.79□□□□□ -1.96
PRKNO60260 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.79□□□□□ -1.96
PRKNO60260 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
PRKNO60260 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
PRKNO60260 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
PRKNO60260 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PRKNO60260 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
PRKNO60260 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PRKNO60260 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PRKNO60260 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
PRKNO60260 RNU6-845P-201ENST00000362578 103 ntBASIC2.78□□□□□ -1.96
PRKNO60260 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PRKNO60260 RNU6-434P-201ENST00000384376 107 ntBASIC2.78□□□□□ -1.96
PRKNO60260 MIR301A-201ENST00000385261 86 ntBASIC2.78□□□□□ -1.96
PRKNO60260 RNU6-1009P-201ENST00000390996 107 ntBASIC2.78□□□□□ -1.96
PRKNO60260 UBA52P6-201ENST00000399822 382 ntBASIC2.78□□□□□ -1.96
PRKNO60260 NDUFB4P4-201ENST00000404822 243 ntBASIC2.78□□□□□ -1.96
PRKNO60260 RPL5P18-201ENST00000406671 891 ntBASIC2.78□□□□□ -1.96
PRKNO60260 POLHP1-201ENST00000411806 470 ntBASIC2.78□□□□□ -1.96
PRKNO60260 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.78□□□□□ -1.96
PRKNO60260 RPL21P90-201ENST00000415692 466 ntBASIC2.78□□□□□ -1.96
PRKNO60260 AC022018.1-201ENST00000430685 241 ntBASIC2.78□□□□□ -1.96
PRKNO60260 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.78□□□□□ -1.96
PRKNO60260 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.78□□□□□ -1.96
PRKNO60260 Z82210.1-201ENST00000440037 231 ntBASIC2.78□□□□□ -1.96
PRKNO60260 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.78□□□□□ -1.96
PRKNO60260 FABP5P15-201ENST00000453566 214 ntBASIC2.78□□□□□ -1.96
PRKNO60260 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.78□□□□□ -1.96
PRKNO60260 HMGN2P13-201ENST00000476476 274 ntBASIC2.78□□□□□ -1.96
PRKNO60260 RPL30P5-201ENST00000494923 336 ntBASIC2.78□□□□□ -1.96
PRKNO60260 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.78□□□□□ -1.96
PRKNO60260 AC010265.1-201ENST00000513509 211 ntBASIC2.78□□□□□ -1.96
PRKNO60260 AC112206.3-201ENST00000514578 389 ntBASIC2.78□□□□□ -1.96
PRKNO60260 RNU2-69P-201ENST00000516061 100 ntBASIC2.78□□□□□ -1.96
PRKNO60260 RNU6-1315P-201ENST00000517187 99 ntBASIC2.78□□□□□ -1.96
PRKNO60260 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.78□□□□□ -1.96
PRKNO60260 TRAV37-201ENST00000553906 342 ntBASIC2.78□□□□□ -1.96
PRKNO60260 OR11H5P-201ENST00000554039 926 ntBASIC2.78□□□□□ -1.96
PRKNO60260 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.78□□□□□ -1.96
PRKNO60260 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PRKNO60260 CTHRC1P1-201ENST00000605383 469 ntBASIC2.78□□□□□ -1.96
PRKNO60260 LARP7P1-201ENST00000605576 316 ntBASIC2.78□□□□□ -1.96
PRKNO60260 U2.17-201ENST00000611454 95 ntBASIC2.78□□□□□ -1.96
PRKNO60260 AC068831.7-201ENST00000616954 363 ntBASIC2.78□□□□□ -1.96
PRKNO60260 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.78□□□□□ -1.96
PRKNO60260 MIR148B-201ENST00000362252 99 ntBASIC2.77□□□□□ -1.97
PRKNO60260 Y_RNA.100-201ENST00000363141 102 ntBASIC2.77□□□□□ -1.97
PRKNO60260 RNU6-82P-201ENST00000363970 107 ntBASIC2.77□□□□□ -1.97
PRKNO60260 RNU6-45P-201ENST00000384471 107 ntBASIC2.77□□□□□ -1.97
PRKNO60260 MIR578-201ENST00000384828 96 ntBASIC2.77□□□□□ -1.97
PRKNO60260 NDUFB4P5-201ENST00000415445 361 ntBASIC2.77□□□□□ -1.97
PRKNO60260 AL645937.1-202ENST00000421799 937 ntBASIC2.77□□□□□ -1.97
PRKNO60260 TMEM167AP1-201ENST00000423409 219 ntBASIC2.77□□□□□ -1.97
PRKNO60260 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.77□□□□□ -1.97
PRKNO60260 AL512844.2-201ENST00000433990 593 ntBASIC2.77□□□□□ -1.97
PRKNO60260 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.77□□□□□ -1.97
PRKNO60260 RNA5SP310-201ENST00000459084 116 ntBASIC2.77□□□□□ -1.97
PRKNO60260 DYNLL1P5-201ENST00000467158 270 ntBASIC2.77□□□□□ -1.97
PRKNO60260 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.77□□□□□ -1.97
PRKNO60260 AL135752.1-201ENST00000479477 471 ntBASIC2.77□□□□□ -1.97
PRKNO60260 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.77□□□□□ -1.97
PRKNO60260 RNU4-49P-201ENST00000516080 140 ntBASIC2.77□□□□□ -1.97
PRKNO60260 RNU6-189P-201ENST00000516120 101 ntBASIC2.77□□□□□ -1.97
PRKNO60260 SNORD59.2-201ENST00000516873 68 ntBASIC2.77□□□□□ -1.97
PRKNO60260 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.77□□□□□ -1.97
PRKNO60260 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.77□□□□□ -1.97
PRKNO60260 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.77□□□□□ -1.97
PRKNO60260 AP000763.2-201ENST00000540641 163 ntBASIC2.77□□□□□ -1.97
PRKNO60260 PSMA3P-201ENST00000555485 635 ntBASIC2.77□□□□□ -1.97
PRKNO60260 AL157871.3-201ENST00000557231 293 ntBASIC2.77□□□□□ -1.97
PRKNO60260 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.77□□□□□ -1.97
PRKNO60260 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.77□□□□□ -1.97
PRKNO60260 MIR548AC-201ENST00000585049 88 ntBASIC2.77□□□□□ -1.97
PRKNO60260 BNIP3P25-201ENST00000596023 559 ntBASIC2.77□□□□□ -1.97
PRKNO60260 VN1R80P-201ENST00000597126 338 ntBASIC2.77□□□□□ -1.97
PRKNO60260 AC012119.1-201ENST00000603184 222 ntBASIC2.77□□□□□ -1.97
PRKNO60260 AC025253.1-201ENST00000613623 543 ntBASIC2.77□□□□□ -1.97
PRKNO60260 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PRKNO60260 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.77□□□□□ -1.97
PRKNO60260 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.77□□□□□ -1.97
PRKNO60260 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PRKNO60260 MAPK10-322ENST00000641485 4530 ntBASIC2.76□□□□□ -1.97
PRKNO60260 AL049641.1-201ENST00000441055 1948 ntBASIC2.76□□□□□ -1.97
PRKNO60260 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
PRKNO60260 RNA5SP383-201ENST00000362934 120 ntBASIC2.76□□□□□ -1.97
PRKNO60260 Y_RNA.167-201ENST00000363735 109 ntBASIC2.76□□□□□ -1.97
PRKNO60260 RNU6-371P-201ENST00000364283 108 ntBASIC2.76□□□□□ -1.97
PRKNO60260 RNU1-140P-201ENST00000365040 165 ntBASIC2.76□□□□□ -1.97
PRKNO60260 MIR634-201ENST00000385208 97 ntBASIC2.76□□□□□ -1.97
PRKNO60260 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
PRKNO60260 RNU6-1077P-201ENST00000410506 102 ntBASIC2.76□□□□□ -1.97
PRKNO60260 AC245054.2-201ENST00000415639 319 ntBASIC2.76□□□□□ -1.97
PRKNO60260 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.76□□□□□ -1.97
PRKNO60260 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.76□□□□□ -1.97
PRKNO60260 IFNA20P-201ENST00000436840 528 ntBASIC2.76□□□□□ -1.97
PRKNO60260 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.76□□□□□ -1.97
PRKNO60260 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.76□□□□□ -1.97
PRKNO60260 AL360271.2-201ENST00000447710 161 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms