Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.36□□□□□ -1.55
ACTN4O43707 CYCSP23-201ENST00000519781 313 ntBASIC5.36□□□□□ -1.55
ACTN4O43707 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.36□□□□□ -1.55
ACTN4O43707 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.36□□□□□ -1.55
ACTN4O43707 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.36□□□□□ -1.55
ACTN4O43707 AC018448.1-201ENST00000552843 316 ntBASIC5.36□□□□□ -1.55
ACTN4O43707 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC5.36□□□□□ -1.55
ACTN4O43707 AC022726.1-201ENST00000587475 207 ntBASIC5.36□□□□□ -1.55
ACTN4O43707 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ACTN4O43707 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.36□□□□□ -1.55
ACTN4O43707 SNORA43.4-201ENST00000629559 138 ntBASIC5.36□□□□□ -1.55
ACTN4O43707 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.36□□□□□ -1.55
ACTN4O43707 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ACTN4O43707 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ACTN4O43707 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
ACTN4O43707 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ACTN4O43707 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ACTN4O43707 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.35□□□□□ -1.55
ACTN4O43707 MAPK10-320ENST00000641462 6696 ntBASIC5.35□□□□□ -1.55
ACTN4O43707 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.35□□□□□ -1.55
ACTN4O43707 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.35□□□□□ -1.55
ACTN4O43707 U3.22-201ENST00000391120 215 ntBASIC5.35□□□□□ -1.55
ACTN4O43707 RNU6-1199P-201ENST00000411249 104 ntBASIC5.35□□□□□ -1.55
ACTN4O43707 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.35□□□□□ -1.55
ACTN4O43707 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ACTN4O43707 EIF4A1P11-201ENST00000451239 222 ntBASIC5.35□□□□□ -1.55
ACTN4O43707 RNU7-197P-201ENST00000458836 62 ntBASIC5.35□□□□□ -1.55
ACTN4O43707 U8.19-201ENST00000459095 133 ntBASIC5.35□□□□□ -1.55
ACTN4O43707 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.35□□□□□ -1.55
ACTN4O43707 RPL21P126-201ENST00000470049 478 ntBASIC5.35□□□□□ -1.55
ACTN4O43707 AL132838.2-201ENST00000492041 314 ntBASIC5.35□□□□□ -1.55
ACTN4O43707 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ACTN4O43707 FCF1P8-201ENST00000510322 597 ntBASIC5.35□□□□□ -1.55
ACTN4O43707 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.35□□□□□ -1.55
ACTN4O43707 RN7SKP122-201ENST00000515923 296 ntBASIC5.35□□□□□ -1.55
ACTN4O43707 RN7SKP46-201ENST00000515942 234 ntBASIC5.35□□□□□ -1.55
ACTN4O43707 RNA5SP464-201ENST00000516251 108 ntBASIC5.35□□□□□ -1.55
ACTN4O43707 ZNF192P1-203ENST00000565888 810 ntBASIC5.35□□□□□ -1.55
ACTN4O43707 AC015912.2-201ENST00000571053 181 ntBASIC5.35□□□□□ -1.55
ACTN4O43707 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.35□□□□□ -1.55
ACTN4O43707 AC024581.2-201ENST00000619986 252 ntBASIC5.35□□□□□ -1.55
ACTN4O43707 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ACTN4O43707 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
ACTN4O43707 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ACTN4O43707 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
ACTN4O43707 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ACTN4O43707 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.34□□□□□ -1.55
ACTN4O43707 AC018529.3-201ENST00000624212 2254 ntBASIC5.34□□□□□ -1.55
ACTN4O43707 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.34□□□□□ -1.55
ACTN4O43707 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
ACTN4O43707 RNU5F-3P-201ENST00000363767 117 ntBASIC5.34□□□□□ -1.55
ACTN4O43707 SNORD32A-201ENST00000364805 84 ntBASIC5.34□□□□□ -1.55
ACTN4O43707 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
ACTN4O43707 AL590762.2-201ENST00000395798 571 ntBASIC5.34□□□□□ -1.55
ACTN4O43707 AC006461.1-201ENST00000412637 326 ntBASIC5.34□□□□□ -1.55
ACTN4O43707 CYP4F29P-201ENST00000420685 446 ntBASIC5.34□□□□□ -1.55
ACTN4O43707 OR2AM1P-201ENST00000422137 422 ntBASIC5.34□□□□□ -1.55
ACTN4O43707 BX510359.3-201ENST00000422168 306 ntBASIC5.34□□□□□ -1.55
ACTN4O43707 RPS26P2-201ENST00000440331 348 ntBASIC5.34□□□□□ -1.55
ACTN4O43707 GPM6BP3-201ENST00000442797 145 ntBASIC5.34□□□□□ -1.55
ACTN4O43707 RNU7-107P-201ENST00000459121 61 ntBASIC5.34□□□□□ -1.55
ACTN4O43707 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.34□□□□□ -1.55
ACTN4O43707 MLLT10P2-201ENST00000506434 249 ntBASIC5.34□□□□□ -1.55
ACTN4O43707 AC006499.6-201ENST00000511169 607 ntBASIC5.34□□□□□ -1.55
ACTN4O43707 RNU5E-3P-201ENST00000515913 68 ntBASIC5.34□□□□□ -1.55
ACTN4O43707 SCARNA21.2-201ENST00000516600 166 ntBASIC5.34□□□□□ -1.55
ACTN4O43707 AP004607.1-201ENST00000524456 203 ntBASIC5.34□□□□□ -1.55
ACTN4O43707 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.34□□□□□ -1.55
ACTN4O43707 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.34□□□□□ -1.55
ACTN4O43707 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ACTN4O43707 MTND5P32-201ENST00000560711 1802 ntBASIC5.34□□□□□ -1.55
ACTN4O43707 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
ACTN4O43707 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
ACTN4O43707 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.56
ACTN4O43707 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
ACTN4O43707 AL359693.1-201ENST00000614959 2407 ntBASIC5.34□□□□□ -1.56
ACTN4O43707 MTND5P35-201ENST00000557537 1720 ntBASIC5.34□□□□□ -1.56
ACTN4O43707 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.34□□□□□ -1.56
ACTN4O43707 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
ACTN4O43707 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ACTN4O43707 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ACTN4O43707 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
ACTN4O43707 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
ACTN4O43707 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC5.33□□□□□ -1.56
ACTN4O43707 RNA5SP305-201ENST00000362665 119 ntBASIC5.33□□□□□ -1.56
ACTN4O43707 RNU6-147P-201ENST00000383983 107 ntBASIC5.33□□□□□ -1.56
ACTN4O43707 RNU6-1310P-201ENST00000384153 107 ntBASIC5.33□□□□□ -1.56
ACTN4O43707 SNORD96B-201ENST00000386148 79 ntBASIC5.33□□□□□ -1.56
ACTN4O43707 RNU6-460P-201ENST00000391158 108 ntBASIC5.33□□□□□ -1.56
ACTN4O43707 RNA5SP31-201ENST00000411144 127 ntBASIC5.33□□□□□ -1.56
ACTN4O43707 AC114755.2-201ENST00000413520 361 ntBASIC5.33□□□□□ -1.56
ACTN4O43707 AC093162.1-201ENST00000419682 124 ntBASIC5.33□□□□□ -1.56
ACTN4O43707 BPY2DP-201ENST00000422208 265 ntBASIC5.33□□□□□ -1.56
ACTN4O43707 RPL23AP95-201ENST00000426806 265 ntBASIC5.33□□□□□ -1.56
ACTN4O43707 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC5.33□□□□□ -1.56
ACTN4O43707 RPL12P46-201ENST00000436610 195 ntBASIC5.33□□□□□ -1.56
ACTN4O43707 AURKAPS2-201ENST00000454983 333 ntBASIC5.33□□□□□ -1.56
ACTN4O43707 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC5.33□□□□□ -1.56
ACTN4O43707 AC091868.1-201ENST00000508746 304 ntBASIC5.33□□□□□ -1.56
ACTN4O43707 RNU2-56P-201ENST00000516826 190 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms