Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 RNU1-30P-201ENST00000606575 163 ntBASIC3.54□□□□□ -1.84
PROM1O43490 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.54□□□□□ -1.84
PROM1O43490 AC005344.1-201ENST00000613391 459 ntBASIC3.54□□□□□ -1.84
PROM1O43490 AC011890.2-201ENST00000613393 294 ntBASIC3.54□□□□□ -1.84
PROM1O43490 AL031601.2-202ENST00000622650 282 ntBASIC3.54□□□□□ -1.84
PROM1O43490 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PROM1O43490 SDAD1P2-201ENST00000441308 2028 ntBASIC3.54□□□□□ -1.84
PROM1O43490 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PROM1O43490 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.54□□□□□ -1.84
PROM1O43490 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
PROM1O43490 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PROM1O43490 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PROM1O43490 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.53□□□□□ -1.84
PROM1O43490 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PROM1O43490 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PROM1O43490 DEFB108F-201ENST00000344638 222 ntBASIC3.53□□□□□ -1.84
PROM1O43490 SNORD62.1-201ENST00000362541 86 ntBASIC3.53□□□□□ -1.84
PROM1O43490 Y_RNA.112-201ENST00000363250 102 ntBASIC3.53□□□□□ -1.84
PROM1O43490 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.53□□□□□ -1.84
PROM1O43490 Y_RNA.534-201ENST00000384599 112 ntBASIC3.53□□□□□ -1.84
PROM1O43490 RNU6-1179P-201ENST00000384667 107 ntBASIC3.53□□□□□ -1.84
PROM1O43490 MIR491-201ENST00000384877 84 ntBASIC3.53□□□□□ -1.84
PROM1O43490 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PROM1O43490 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PROM1O43490 RN7SKP156-201ENST00000410308 342 ntBASIC3.53□□□□□ -1.84
PROM1O43490 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.53□□□□□ -1.84
PROM1O43490 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.53□□□□□ -1.84
PROM1O43490 AL139247.1-201ENST00000422768 325 ntBASIC3.53□□□□□ -1.84
PROM1O43490 HMGB1P9-201ENST00000429856 646 ntBASIC3.53□□□□□ -1.84
PROM1O43490 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.53□□□□□ -1.84
PROM1O43490 HIGD1AP11-201ENST00000438361 280 ntBASIC3.53□□□□□ -1.84
PROM1O43490 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.53□□□□□ -1.84
PROM1O43490 AL360271.2-201ENST00000447710 161 ntBASIC3.53□□□□□ -1.84
PROM1O43490 AL136097.1-201ENST00000456945 913 ntBASIC3.53□□□□□ -1.84
PROM1O43490 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.53□□□□□ -1.84
PROM1O43490 RNU6-1046P-201ENST00000516538 107 ntBASIC3.53□□□□□ -1.84
PROM1O43490 AC104576.1-201ENST00000524225 88 ntBASIC3.53□□□□□ -1.84
PROM1O43490 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.53□□□□□ -1.84
PROM1O43490 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.53□□□□□ -1.84
PROM1O43490 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.53□□□□□ -1.84
PROM1O43490 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PROM1O43490 BNIP3P16-201ENST00000589779 534 ntBASIC3.53□□□□□ -1.84
PROM1O43490 AC107294.1-201ENST00000609524 467 ntBASIC3.53□□□□□ -1.84
PROM1O43490 AC083806.3-201ENST00000614016 455 ntBASIC3.53□□□□□ -1.84
PROM1O43490 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.53□□□□□ -1.84
PROM1O43490 AC091925.1-201ENST00000623204 462 ntBASIC3.53□□□□□ -1.84
PROM1O43490 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.53□□□□□ -1.84
PROM1O43490 AC009093.8-201ENST00000641769 292 ntBASIC3.53□□□□□ -1.84
PROM1O43490 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PROM1O43490 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.53□□□□□ -1.84
PROM1O43490 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PROM1O43490 MTND5P16-201ENST00000460269 1703 ntBASIC3.53□□□□□ -1.85
PROM1O43490 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.53□□□□□ -1.85
PROM1O43490 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PROM1O43490 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PROM1O43490 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PROM1O43490 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.52□□□□□ -1.85
PROM1O43490 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PROM1O43490 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PROM1O43490 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PROM1O43490 Y_RNA.2-201ENST00000362330 96 ntBASIC3.52□□□□□ -1.85
PROM1O43490 Y_RNA.404-201ENST00000383978 102 ntBASIC3.52□□□□□ -1.85
PROM1O43490 RNU6-1106P-201ENST00000390845 107 ntBASIC3.52□□□□□ -1.85
PROM1O43490 SNORA57.3-201ENST00000411095 141 ntBASIC3.52□□□□□ -1.85
PROM1O43490 AC002075.2-201ENST00000425207 252 ntBASIC3.52□□□□□ -1.85
PROM1O43490 AC091286.1-201ENST00000431233 461 ntBASIC3.52□□□□□ -1.85
PROM1O43490 AL160004.2-201ENST00000432935 350 ntBASIC3.52□□□□□ -1.85
PROM1O43490 RPL23AP50-201ENST00000434149 455 ntBASIC3.52□□□□□ -1.85
PROM1O43490 AL035666.1-201ENST00000446195 348 ntBASIC3.52□□□□□ -1.85
PROM1O43490 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.52□□□□□ -1.85
PROM1O43490 AL133162.1-201ENST00000463228 453 ntBASIC3.52□□□□□ -1.85
PROM1O43490 RPL7P5-201ENST00000471472 736 ntBASIC3.52□□□□□ -1.85
PROM1O43490 SUMO2P6-201ENST00000505273 288 ntBASIC3.52□□□□□ -1.85
PROM1O43490 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.52□□□□□ -1.85
PROM1O43490 AC110768.1-201ENST00000509222 400 ntBASIC3.52□□□□□ -1.85
PROM1O43490 AC092436.3-201ENST00000511788 257 ntBASIC3.52□□□□□ -1.85
PROM1O43490 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.52□□□□□ -1.85
PROM1O43490 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.52□□□□□ -1.85
PROM1O43490 AC100830.2-201ENST00000581636 240 ntBASIC3.52□□□□□ -1.85
PROM1O43490 AC098826.3-201ENST00000603823 466 ntBASIC3.52□□□□□ -1.85
PROM1O43490 AC096577.2-201ENST00000611455 153 ntBASIC3.52□□□□□ -1.85
PROM1O43490 AL161423.1-201ENST00000613700 262 ntBASIC3.52□□□□□ -1.85
PROM1O43490 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.52□□□□□ -1.85
PROM1O43490 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PROM1O43490 AC032011.1-201ENST00000611703 1549 ntBASIC3.52□□□□□ -1.85
PROM1O43490 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PROM1O43490 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PROM1O43490 MFSD8-236ENST00000641509 4050 ntBASIC3.52□□□□□ -1.85
PROM1O43490 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
PROM1O43490 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PROM1O43490 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PROM1O43490 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.51□□□□□ -1.85
PROM1O43490 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PROM1O43490 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
PROM1O43490 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
PROM1O43490 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.51□□□□□ -1.85
PROM1O43490 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PROM1O43490 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
PROM1O43490 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.51□□□□□ -1.85
PROM1O43490 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms