Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC009901.1-201ENST00000506703 541 ntBASIC3.7□□□□□ -1.82
PRPF3O43395 SNORA14.1-201ENST00000516113 141 ntBASIC3.7□□□□□ -1.82
PRPF3O43395 RNU1-143P-201ENST00000516296 146 ntBASIC3.7□□□□□ -1.82
PRPF3O43395 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.7□□□□□ -1.82
PRPF3O43395 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.7□□□□□ -1.82
PRPF3O43395 AC005498.1-201ENST00000592125 465 ntBASIC3.7□□□□□ -1.82
PRPF3O43395 AC092807.2-201ENST00000609367 243 ntBASIC3.7□□□□□ -1.82
PRPF3O43395 U1.23-201ENST00000610293 146 ntBASIC3.7□□□□□ -1.82
PRPF3O43395 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
PRPF3O43395 RNU1-68P-201ENST00000615382 146 ntBASIC3.7□□□□□ -1.82
PRPF3O43395 U1.39-201ENST00000621562 146 ntBASIC3.7□□□□□ -1.82
PRPF3O43395 DUXAP9-208ENST00000622815 614 ntBASIC3.7□□□□□ -1.82
PRPF3O43395 AC091953.5-201ENST00000622919 233 ntBASIC3.7□□□□□ -1.82
PRPF3O43395 AC091903.1-201ENST00000624322 454 ntBASIC3.7□□□□□ -1.82
PRPF3O43395 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.7□□□□□ -1.82
PRPF3O43395 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.7□□□□□ -1.82
PRPF3O43395 AC099654.7-201ENST00000635788 2127 ntBASIC3.7□□□□□ -1.82
PRPF3O43395 CDC27P3-201ENST00000635418 1910 ntBASIC3.7□□□□□ -1.82
PRPF3O43395 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PRPF3O43395 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PRPF3O43395 RNU6-1027P-201ENST00000383998 107 ntBASIC3.69□□□□□ -1.82
PRPF3O43395 RNY3P14-201ENST00000384309 102 ntBASIC3.69□□□□□ -1.82
PRPF3O43395 MT-TL1-201ENST00000386347 75 ntBASIC3.69□□□□□ -1.82
PRPF3O43395 RNU6-332P-201ENST00000391193 108 ntBASIC3.69□□□□□ -1.82
PRPF3O43395 AL356776.1-201ENST00000406574 447 ntBASIC3.69□□□□□ -1.82
PRPF3O43395 RNU4-47P-201ENST00000410876 114 ntBASIC3.69□□□□□ -1.82
PRPF3O43395 USP9YP20-201ENST00000419224 558 ntBASIC3.69□□□□□ -1.82
PRPF3O43395 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.69□□□□□ -1.82
PRPF3O43395 RPS27P29-201ENST00000463110 252 ntBASIC3.69□□□□□ -1.82
PRPF3O43395 DYNLL1P5-201ENST00000467158 270 ntBASIC3.69□□□□□ -1.82
PRPF3O43395 AP000852.1-201ENST00000472460 573 ntBASIC3.69□□□□□ -1.82
PRPF3O43395 CCDC34P1-201ENST00000507441 517 ntBASIC3.69□□□□□ -1.82
PRPF3O43395 SNORA64.4-201ENST00000516632 81 ntBASIC3.69□□□□□ -1.82
PRPF3O43395 SCARNA13-201ENST00000516672 275 ntBASIC3.69□□□□□ -1.82
PRPF3O43395 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.69□□□□□ -1.82
PRPF3O43395 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.69□□□□□ -1.82
PRPF3O43395 CYCSP39-201ENST00000565821 309 ntBASIC3.69□□□□□ -1.82
PRPF3O43395 MIR5680-201ENST00000577577 84 ntBASIC3.69□□□□□ -1.82
PRPF3O43395 VN1R80P-201ENST00000597126 338 ntBASIC3.69□□□□□ -1.82
PRPF3O43395 AC092747.3-201ENST00000603769 301 ntBASIC3.69□□□□□ -1.82
PRPF3O43395 BNIP3P10-201ENST00000605360 577 ntBASIC3.69□□□□□ -1.82
PRPF3O43395 uc_338.25-201ENST00000613756 156 ntBASIC3.69□□□□□ -1.82
PRPF3O43395 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PRPF3O43395 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PRPF3O43395 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.69□□□□□ -1.82
PRPF3O43395 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
PRPF3O43395 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PRPF3O43395 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.69□□□□□ -1.82
PRPF3O43395 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.68□□□□□ -1.82
PRPF3O43395 ADAM3A-203ENST00000461344 2157 ntBASIC3.68□□□□□ -1.82
PRPF3O43395 Y_RNA.86-201ENST00000363020 111 ntBASIC3.68□□□□□ -1.82
PRPF3O43395 SNORA75B-201ENST00000384053 137 ntBASIC3.68□□□□□ -1.82
PRPF3O43395 SNORA9-201ENST00000384215 133 ntBASIC3.68□□□□□ -1.82
PRPF3O43395 MIR491-201ENST00000384877 84 ntBASIC3.68□□□□□ -1.82
PRPF3O43395 RNA5SP354-201ENST00000391247 136 ntBASIC3.68□□□□□ -1.82
PRPF3O43395 U3.37-201ENST00000408528 213 ntBASIC3.68□□□□□ -1.82
PRPF3O43395 RNU2-3P-201ENST00000410144 191 ntBASIC3.68□□□□□ -1.82
PRPF3O43395 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.68□□□□□ -1.82
PRPF3O43395 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.68□□□□□ -1.82
PRPF3O43395 RPS15AP5-201ENST00000436276 388 ntBASIC3.68□□□□□ -1.82
PRPF3O43395 AL671855.1-201ENST00000446875 1203 ntBASIC3.68□□□□□ -1.82
PRPF3O43395 RN7SL807P-201ENST00000470923 297 ntBASIC3.68□□□□□ -1.82
PRPF3O43395 AC109925.1-201ENST00000478069 331 ntBASIC3.68□□□□□ -1.82
PRPF3O43395 MTND3P25-201ENST00000509243 135 ntBASIC3.68□□□□□ -1.82
PRPF3O43395 AC025465.4-201ENST00000513422 638 ntBASIC3.68□□□□□ -1.82
PRPF3O43395 RNU6-1038P-201ENST00000516516 104 ntBASIC3.68□□□□□ -1.82
PRPF3O43395 SNORA70.24-201ENST00000517233 118 ntBASIC3.68□□□□□ -1.82
PRPF3O43395 AP004607.1-201ENST00000524456 203 ntBASIC3.68□□□□□ -1.82
PRPF3O43395 AC021739.1-201ENST00000559631 174 ntBASIC3.68□□□□□ -1.82
PRPF3O43395 HMGN2P15-201ENST00000585707 270 ntBASIC3.68□□□□□ -1.82
PRPF3O43395 NUTF2P8-201ENST00000604593 363 ntBASIC3.68□□□□□ -1.82
PRPF3O43395 AC107294.3-201ENST00000609211 526 ntBASIC3.68□□□□□ -1.82
PRPF3O43395 AC096577.2-201ENST00000611455 153 ntBASIC3.68□□□□□ -1.82
PRPF3O43395 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.68□□□□□ -1.82
PRPF3O43395 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.68□□□□□ -1.82
PRPF3O43395 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
PRPF3O43395 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PRPF3O43395 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PRPF3O43395 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
PRPF3O43395 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
PRPF3O43395 AL079305.1-201ENST00000623159 3008 ntBASIC3.68□□□□□ -1.82
PRPF3O43395 AC073346.2-201ENST00000624724 2058 ntBASIC3.67□□□□□ -1.82
PRPF3O43395 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.67□□□□□ -1.82
PRPF3O43395 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRPF3O43395 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PRPF3O43395 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRPF3O43395 SNORD113-7-201ENST00000363762 77 ntBASIC3.67□□□□□ -1.82
PRPF3O43395 RNU6-522P-201ENST00000364497 107 ntBASIC3.67□□□□□ -1.82
PRPF3O43395 Y_RNA.303-201ENST00000364998 94 ntBASIC3.67□□□□□ -1.82
PRPF3O43395 Y_RNA.324-201ENST00000365165 102 ntBASIC3.67□□□□□ -1.82
PRPF3O43395 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.67□□□□□ -1.82
PRPF3O43395 MIR10A-201ENST00000385043 110 ntBASIC3.67□□□□□ -1.82
PRPF3O43395 U3.19-201ENST00000390893 196 ntBASIC3.67□□□□□ -1.82
PRPF3O43395 RNA5SP219-201ENST00000390940 113 ntBASIC3.67□□□□□ -1.82
PRPF3O43395 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.67□□□□□ -1.82
PRPF3O43395 AL592148.1-201ENST00000413568 445 ntBASIC3.67□□□□□ -1.82
PRPF3O43395 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.67□□□□□ -1.82
PRPF3O43395 NDUFA5P4-201ENST00000436704 385 ntBASIC3.67□□□□□ -1.82
PRPF3O43395 RPL23AP22-201ENST00000437556 453 ntBASIC3.67□□□□□ -1.82
PRPF3O43395 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms