Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RPL7P37-201ENST00000425095 738 ntBASIC3.45□□□□□ -1.86
PHGDHO43175 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PHGDHO43175 SNAP23P1-201ENST00000433229 246 ntBASIC3.45□□□□□ -1.86
PHGDHO43175 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.45□□□□□ -1.86
PHGDHO43175 HMGN2P10-201ENST00000448085 265 ntBASIC3.45□□□□□ -1.86
PHGDHO43175 AC107399.1-201ENST00000451226 265 ntBASIC3.45□□□□□ -1.86
PHGDHO43175 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PHGDHO43175 RPS4XP2-201ENST00000458402 793 ntBASIC3.45□□□□□ -1.86
PHGDHO43175 AC010401.1-201ENST00000463867 348 ntBASIC3.45□□□□□ -1.86
PHGDHO43175 RPL7P47-201ENST00000497299 556 ntBASIC3.45□□□□□ -1.86
PHGDHO43175 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.45□□□□□ -1.86
PHGDHO43175 FGF7P4-201ENST00000509595 295 ntBASIC3.45□□□□□ -1.86
PHGDHO43175 AC113155.1-201ENST00000511141 769 ntBASIC3.45□□□□□ -1.86
PHGDHO43175 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.45□□□□□ -1.86
PHGDHO43175 SNORA70.19-201ENST00000516717 90 ntBASIC3.45□□□□□ -1.86
PHGDHO43175 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.45□□□□□ -1.86
PHGDHO43175 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.45□□□□□ -1.86
PHGDHO43175 AC104576.1-201ENST00000524225 88 ntBASIC3.45□□□□□ -1.86
PHGDHO43175 AL163153.1-201ENST00000554223 283 ntBASIC3.45□□□□□ -1.86
PHGDHO43175 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.45□□□□□ -1.86
PHGDHO43175 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.45□□□□□ -1.86
PHGDHO43175 AL670379.10-201ENST00000604330 253 ntBASIC3.45□□□□□ -1.86
PHGDHO43175 ELOCP5-201ENST00000604924 333 ntBASIC3.45□□□□□ -1.86
PHGDHO43175 AL670379.9-201ENST00000605428 253 ntBASIC3.45□□□□□ -1.86
PHGDHO43175 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.45□□□□□ -1.86
PHGDHO43175 AC004852.3-201ENST00000614131 326 ntBASIC3.45□□□□□ -1.86
PHGDHO43175 MIR6134-201ENST00000617606 109 ntBASIC3.45□□□□□ -1.86
PHGDHO43175 MIR1302-1-201ENST00000637932 143 ntBASIC3.45□□□□□ -1.86
PHGDHO43175 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.45□□□□□ -1.86
PHGDHO43175 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.45□□□□□ -1.86
PHGDHO43175 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.45□□□□□ -1.86
PHGDHO43175 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.45□□□□□ -1.86
PHGDHO43175 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PHGDHO43175 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
PHGDHO43175 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PHGDHO43175 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PHGDHO43175 RNU6-1329P-201ENST00000365664 107 ntBASIC3.44□□□□□ -1.86
PHGDHO43175 Y_RNA.509-201ENST00000384506 99 ntBASIC3.44□□□□□ -1.86
PHGDHO43175 AL445529.1-201ENST00000398713 389 ntBASIC3.44□□□□□ -1.86
PHGDHO43175 SNORD56-201ENST00000413522 71 ntBASIC3.44□□□□□ -1.86
PHGDHO43175 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.44□□□□□ -1.86
PHGDHO43175 AL590632.1-201ENST00000424289 371 ntBASIC3.44□□□□□ -1.86
PHGDHO43175 UBE2V1P4-201ENST00000425374 344 ntBASIC3.44□□□□□ -1.86
PHGDHO43175 BX679664.1-201ENST00000434429 253 ntBASIC3.44□□□□□ -1.86
PHGDHO43175 RPS15AP5-201ENST00000436276 388 ntBASIC3.44□□□□□ -1.86
PHGDHO43175 HIGD1AP2-201ENST00000446367 280 ntBASIC3.44□□□□□ -1.86
PHGDHO43175 FTH1P2-201ENST00000466086 412 ntBASIC3.44□□□□□ -1.86
PHGDHO43175 MTND4P17-201ENST00000470444 350 ntBASIC3.44□□□□□ -1.86
PHGDHO43175 RPL23AP45-201ENST00000476406 468 ntBASIC3.44□□□□□ -1.86
PHGDHO43175 AC092436.3-201ENST00000511788 257 ntBASIC3.44□□□□□ -1.86
PHGDHO43175 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.44□□□□□ -1.86
PHGDHO43175 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.44□□□□□ -1.86
PHGDHO43175 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.44□□□□□ -1.86
PHGDHO43175 AP004607.1-201ENST00000524456 203 ntBASIC3.44□□□□□ -1.86
PHGDHO43175 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.44□□□□□ -1.86
PHGDHO43175 AC093027.1-201ENST00000546698 429 ntBASIC3.44□□□□□ -1.86
PHGDHO43175 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.44□□□□□ -1.86
PHGDHO43175 AC007151.1-201ENST00000572774 483 ntBASIC3.44□□□□□ -1.86
PHGDHO43175 AC100830.2-201ENST00000581636 240 ntBASIC3.44□□□□□ -1.86
PHGDHO43175 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PHGDHO43175 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.44□□□□□ -1.86
PHGDHO43175 MIR3199-2-201ENST00000636243 86 ntBASIC3.44□□□□□ -1.86
PHGDHO43175 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PHGDHO43175 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PHGDHO43175 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.44□□□□□ -1.86
PHGDHO43175 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.44□□□□□ -1.86
PHGDHO43175 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PHGDHO43175 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PHGDHO43175 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
PHGDHO43175 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PHGDHO43175 AC091152.2-201ENST00000591628 2569 ntBASIC3.43□□□□□ -1.86
PHGDHO43175 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PHGDHO43175 RNU5E-7P-201ENST00000365290 117 ntBASIC3.43□□□□□ -1.86
PHGDHO43175 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PHGDHO43175 PTMAP5-201ENST00000393073 333 ntBASIC3.43□□□□□ -1.86
PHGDHO43175 MIR548K-201ENST00000408406 116 ntBASIC3.43□□□□□ -1.86
PHGDHO43175 RN7SKP202-201ENST00000410439 330 ntBASIC3.43□□□□□ -1.86
PHGDHO43175 AC074085.1-201ENST00000413598 418 ntBASIC3.43□□□□□ -1.86
PHGDHO43175 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.43□□□□□ -1.86
PHGDHO43175 AP000907.1-201ENST00000428428 510 ntBASIC3.43□□□□□ -1.86
PHGDHO43175 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.43□□□□□ -1.86
PHGDHO43175 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.43□□□□□ -1.86
PHGDHO43175 HIGD1AP11-201ENST00000438361 280 ntBASIC3.43□□□□□ -1.86
PHGDHO43175 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.43□□□□□ -1.86
PHGDHO43175 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.43□□□□□ -1.86
PHGDHO43175 AC130509.1-201ENST00000464158 433 ntBASIC3.43□□□□□ -1.86
PHGDHO43175 RN7SL442P-201ENST00000473804 320 ntBASIC3.43□□□□□ -1.86
PHGDHO43175 AC096745.1-201ENST00000509945 370 ntBASIC3.43□□□□□ -1.86
PHGDHO43175 Y_RNA.675-201ENST00000516389 149 ntBASIC3.43□□□□□ -1.86
PHGDHO43175 SNORA31.21-201ENST00000517180 77 ntBASIC3.43□□□□□ -1.86
PHGDHO43175 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PHGDHO43175 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.43□□□□□ -1.86
PHGDHO43175 AC021739.1-201ENST00000559631 174 ntBASIC3.43□□□□□ -1.86
PHGDHO43175 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.43□□□□□ -1.86
PHGDHO43175 AC106785.1-201ENST00000565935 262 ntBASIC3.43□□□□□ -1.86
PHGDHO43175 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.43□□□□□ -1.86
PHGDHO43175 MIR4795-201ENST00000584182 89 ntBASIC3.43□□□□□ -1.86
PHGDHO43175 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.43□□□□□ -1.86
PHGDHO43175 AC020895.1-201ENST00000595362 272 ntBASIC3.43□□□□□ -1.86
PHGDHO43175 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms