Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.56□□□□□ -1.84
TRIM38O00635 Y_RNA.197-201ENST00000364004 102 ntBASIC3.56□□□□□ -1.84
TRIM38O00635 RNU6-512P-201ENST00000364438 103 ntBASIC3.56□□□□□ -1.84
TRIM38O00635 RNU4-20P-201ENST00000365601 151 ntBASIC3.56□□□□□ -1.84
TRIM38O00635 Y_RNA.576-201ENST00000384781 102 ntBASIC3.56□□□□□ -1.84
TRIM38O00635 AC092809.3-201ENST00000415453 231 ntBASIC3.56□□□□□ -1.84
TRIM38O00635 HSPE1P1-201ENST00000421494 318 ntBASIC3.56□□□□□ -1.84
TRIM38O00635 AL592045.1-201ENST00000429867 352 ntBASIC3.56□□□□□ -1.84
TRIM38O00635 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.56□□□□□ -1.84
TRIM38O00635 SNRPEP9-201ENST00000436794 238 ntBASIC3.56□□□□□ -1.84
TRIM38O00635 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.56□□□□□ -1.84
TRIM38O00635 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM38O00635 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM38O00635 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM38O00635 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.56□□□□□ -1.84
TRIM38O00635 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.56□□□□□ -1.84
TRIM38O00635 MTCO2P24-201ENST00000515611 426 ntBASIC3.56□□□□□ -1.84
TRIM38O00635 SNORA70.18-201ENST00000516696 98 ntBASIC3.56□□□□□ -1.84
TRIM38O00635 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.56□□□□□ -1.84
TRIM38O00635 AP003122.3-201ENST00000526316 255 ntBASIC3.56□□□□□ -1.84
TRIM38O00635 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM38O00635 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM38O00635 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM38O00635 AC007938.3-201ENST00000604965 623 ntBASIC3.56□□□□□ -1.84
TRIM38O00635 CTHRC1P1-201ENST00000605383 469 ntBASIC3.56□□□□□ -1.84
TRIM38O00635 FTX_3.1-201ENST00000610451 147 ntBASIC3.56□□□□□ -1.84
TRIM38O00635 MIR3651-201ENST00000630427 90 ntBASIC3.56□□□□□ -1.84
TRIM38O00635 U6.98-201ENST00000637157 84 ntBASIC3.56□□□□□ -1.84
TRIM38O00635 AP000553.6-201ENST00000641242 118 ntBASIC3.56□□□□□ -1.84
TRIM38O00635 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM38O00635 AC058791.1-201ENST00000608412 3198 ntBASIC3.55□□□□□ -1.84
TRIM38O00635 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM38O00635 AC010680.1-201ENST00000590024 3590 ntBASIC3.55□□□□□ -1.84
TRIM38O00635 Y_RNA.255-201ENST00000364581 97 ntBASIC3.55□□□□□ -1.84
TRIM38O00635 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
TRIM38O00635 RNU6-1029P-201ENST00000384109 107 ntBASIC3.55□□□□□ -1.84
TRIM38O00635 MIR591-201ENST00000385290 95 ntBASIC3.55□□□□□ -1.84
TRIM38O00635 RNU6-1106P-201ENST00000390845 107 ntBASIC3.55□□□□□ -1.84
TRIM38O00635 RNU2-29P-201ENST00000410423 189 ntBASIC3.55□□□□□ -1.84
TRIM38O00635 RNU4-46P-201ENST00000410818 138 ntBASIC3.55□□□□□ -1.84
TRIM38O00635 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM38O00635 AC114482.1-201ENST00000418010 247 ntBASIC3.55□□□□□ -1.84
TRIM38O00635 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM38O00635 RPL31P12-201ENST00000422587 358 ntBASIC3.55□□□□□ -1.84
TRIM38O00635 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM38O00635 RPL23AP82-202ENST00000427528 469 ntBASIC3.55□□□□□ -1.84
TRIM38O00635 RPS29P15-201ENST00000458329 171 ntBASIC3.55□□□□□ -1.84
TRIM38O00635 RPS15AP34-201ENST00000487776 387 ntBASIC3.55□□□□□ -1.84
TRIM38O00635 AC026782.1-201ENST00000512952 449 ntBASIC3.55□□□□□ -1.84
TRIM38O00635 SCARNA13-201ENST00000516672 275 ntBASIC3.55□□□□□ -1.84
TRIM38O00635 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM38O00635 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM38O00635 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM38O00635 AC084851.1-201ENST00000529105 249 ntBASIC3.55□□□□□ -1.84
TRIM38O00635 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.55□□□□□ -1.84
TRIM38O00635 SNRPGP18-201ENST00000553000 214 ntBASIC3.55□□□□□ -1.84
TRIM38O00635 MIR4703-201ENST00000577728 79 ntBASIC3.55□□□□□ -1.84
TRIM38O00635 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
TRIM38O00635 APOOP1-201ENST00000604695 592 ntBASIC3.55□□□□□ -1.84
TRIM38O00635 AP000654.2-201ENST00000605633 586 ntBASIC3.55□□□□□ -1.84
TRIM38O00635 MIR15A-201ENST00000607334 83 ntBASIC3.55□□□□□ -1.84
TRIM38O00635 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM38O00635 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM38O00635 AC244517.12-201ENST00000623581 663 ntBASIC3.55□□□□□ -1.84
TRIM38O00635 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM38O00635 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM38O00635 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM38O00635 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM38O00635 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.55□□□□□ -1.84
TRIM38O00635 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.55□□□□□ -1.84
TRIM38O00635 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
TRIM38O00635 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM38O00635 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM38O00635 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM38O00635 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM38O00635 AC007256.1-201ENST00000392253 2765 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM38O00635 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM38O00635 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM38O00635 ASNSP3-201ENST00000451989 1306 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM38O00635 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM38O00635 FTLP6-201ENST00000355274 422 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 Y_RNA.28-201ENST00000362554 111 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 MIR514A2-201ENST00000385131 88 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 MIR514A3-201ENST00000385132 88 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM38O00635 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM38O00635 MIR888-201ENST00000401186 77 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 RNU2-68P-201ENST00000410878 191 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 Z92545.1-201ENST00000411782 234 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM38O00635 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM38O00635 CYCSP32-201ENST00000440548 321 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM38O00635 AL137792.2-201ENST00000443484 235 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 HMGB3P8-201ENST00000449709 577 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 MTND3P16-201ENST00000452205 344 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 RBMY2UP-201ENST00000453474 324 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 AC006539.3-201ENST00000454258 129 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms