Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 RPS3AP37-201ENST00000419176 745 ntBASIC0.4□□□□□ -2.35
CACNA1AO00555 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC0.4□□□□□ -2.35
CACNA1AO00555 AL035666.1-201ENST00000446195 348 ntBASIC0.4□□□□□ -2.35
CACNA1AO00555 RPL23AP6-201ENST00000446637 472 ntBASIC0.4□□□□□ -2.35
CACNA1AO00555 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC0.4□□□□□ -2.35
CACNA1AO00555 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.4□□□□□ -2.35
CACNA1AO00555 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC0.4□□□□□ -2.35
CACNA1AO00555 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.4□□□□□ -2.35
CACNA1AO00555 PRR13P7-201ENST00000605538 430 ntBASIC0.4□□□□□ -2.35
CACNA1AO00555 AC106800.4-201ENST00000614905 153 ntBASIC0.4□□□□□ -2.35
CACNA1AO00555 AC027309.3-201ENST00000623419 351 ntBASIC0.4□□□□□ -2.35
CACNA1AO00555 SNORD114-28-201ENST00000363610 72 ntBASIC0.39□□□□□ -2.35
CACNA1AO00555 SNORA38-201ENST00000363946 132 ntBASIC0.39□□□□□ -2.35
CACNA1AO00555 RNU4-9P-201ENST00000364951 139 ntBASIC0.39□□□□□ -2.35
CACNA1AO00555 MIR146A-201ENST00000385201 99 ntBASIC0.39□□□□□ -2.35
CACNA1AO00555 AC092634.6-201ENST00000418558 192 ntBASIC0.39□□□□□ -2.35
CACNA1AO00555 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.39□□□□□ -2.35
CACNA1AO00555 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.39□□□□□ -2.35
CACNA1AO00555 RPL36P19-201ENST00000430744 301 ntBASIC0.39□□□□□ -2.35
CACNA1AO00555 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.39□□□□□ -2.35
CACNA1AO00555 ELOCP11-201ENST00000436690 332 ntBASIC0.39□□□□□ -2.35
CACNA1AO00555 ELOCP16-201ENST00000444494 332 ntBASIC0.39□□□□□ -2.35
CACNA1AO00555 MTATP6P7-201ENST00000453315 681 ntBASIC0.39□□□□□ -2.35
CACNA1AO00555 BX248409.1-201ENST00000455497 255 ntBASIC0.39□□□□□ -2.35
CACNA1AO00555 SETP11-201ENST00000473027 690 ntBASIC0.39□□□□□ -2.35
CACNA1AO00555 AC139453.3-201ENST00000493276 369 ntBASIC0.39□□□□□ -2.35
CACNA1AO00555 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC0.39□□□□□ -2.35
CACNA1AO00555 AC111193.1-201ENST00000504097 155 ntBASIC0.39□□□□□ -2.35
CACNA1AO00555 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.39□□□□□ -2.35
CACNA1AO00555 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC0.39□□□□□ -2.35
CACNA1AO00555 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC0.39□□□□□ -2.35
CACNA1AO00555 MIR4768-201ENST00000585270 74 ntBASIC0.39□□□□□ -2.35
CACNA1AO00555 RAC1P9-201ENST00000604990 392 ntBASIC0.39□□□□□ -2.35
CACNA1AO00555 UCA1.1-201ENST00000620952 75 ntBASIC0.39□□□□□ -2.35
CACNA1AO00555 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC0.39□□□□□ -2.35
CACNA1AO00555 RNA5SP93-201ENST00000362525 114 ntBASIC0.39□□□□□ -2.35
CACNA1AO00555 MT-TC-201ENST00000387405 66 ntBASIC0.39□□□□□ -2.35
CACNA1AO00555 RNU6-821P-201ENST00000390995 107 ntBASIC0.39□□□□□ -2.35
CACNA1AO00555 U3.29-201ENST00000391296 212 ntBASIC0.39□□□□□ -2.35
CACNA1AO00555 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.39□□□□□ -2.35
CACNA1AO00555 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC0.39□□□□□ -2.35
CACNA1AO00555 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC0.39□□□□□ -2.35
CACNA1AO00555 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.39□□□□□ -2.35
CACNA1AO00555 AC108120.2-201ENST00000512973 294 ntBASIC0.39□□□□□ -2.35
CACNA1AO00555 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC0.39□□□□□ -2.35
CACNA1AO00555 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC0.39□□□□□ -2.35
CACNA1AO00555 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.39□□□□□ -2.35
CACNA1AO00555 DUXAP10-204ENST00000612052 616 ntBASIC0.39□□□□□ -2.35
CACNA1AO00555 AL161629.2-201ENST00000615347 275 ntBASIC0.39□□□□□ -2.35
CACNA1AO00555 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.39□□□□□ -2.35
CACNA1AO00555 AL513185.3-201ENST00000433335 1300 ntBASIC0.38□□□□□ -2.35
CACNA1AO00555 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
CACNA1AO00555 RPL7P30-201ENST00000420888 709 ntBASIC0.38□□□□□ -2.35
CACNA1AO00555 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.38□□□□□ -2.35
CACNA1AO00555 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.38□□□□□ -2.35
CACNA1AO00555 SNRPGP6-201ENST00000451124 220 ntBASIC0.38□□□□□ -2.35
CACNA1AO00555 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.38□□□□□ -2.35
CACNA1AO00555 AC093770.1-201ENST00000511559 571 ntBASIC0.38□□□□□ -2.35
CACNA1AO00555 SNORA31.13-201ENST00000516624 135 ntBASIC0.38□□□□□ -2.35
CACNA1AO00555 AC087685.1-201ENST00000587507 141 ntBASIC0.38□□□□□ -2.35
CACNA1AO00555 VN1R82P-201ENST00000601481 356 ntBASIC0.38□□□□□ -2.35
CACNA1AO00555 AC055876.5-201ENST00000605667 259 ntBASIC0.38□□□□□ -2.35
CACNA1AO00555 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC0.38□□□□□ -2.35
CACNA1AO00555 RNU6-40P-201ENST00000384254 107 ntBASIC0.38□□□□□ -2.35
CACNA1AO00555 RNU2-21P-201ENST00000410368 188 ntBASIC0.38□□□□□ -2.35
CACNA1AO00555 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.38□□□□□ -2.35
CACNA1AO00555 RPL21P32-201ENST00000419877 477 ntBASIC0.38□□□□□ -2.35
CACNA1AO00555 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.38□□□□□ -2.35
CACNA1AO00555 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.38□□□□□ -2.35
CACNA1AO00555 HSPE1P9-201ENST00000440046 311 ntBASIC0.38□□□□□ -2.35
CACNA1AO00555 Z77249.1-201ENST00000444622 1175 ntBASIC0.38□□□□□ -2.35
CACNA1AO00555 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC0.38□□□□□ -2.35
CACNA1AO00555 RNU7-26P-201ENST00000458980 63 ntBASIC0.38□□□□□ -2.35
CACNA1AO00555 RPL30P5-201ENST00000494923 336 ntBASIC0.38□□□□□ -2.35
CACNA1AO00555 ELOCP32-201ENST00000548625 324 ntBASIC0.38□□□□□ -2.35
CACNA1AO00555 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC0.38□□□□□ -2.35
CACNA1AO00555 AC074051.3-201ENST00000570238 358 ntBASIC0.38□□□□□ -2.35
CACNA1AO00555 AC243960.4-201ENST00000600532 288 ntBASIC0.38□□□□□ -2.35
CACNA1AO00555 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC0.38□□□□□ -2.35
CACNA1AO00555 Z75746.1-201ENST00000440243 2080 ntBASIC0.38□□□□□ -2.35
CACNA1AO00555 RNU6-1216P-201ENST00000362590 107 ntBASIC0.37□□□□□ -2.35
CACNA1AO00555 RNU6-575P-201ENST00000411326 105 ntBASIC0.37□□□□□ -2.35
CACNA1AO00555 USP9YP18-201ENST00000425912 695 ntBASIC0.37□□□□□ -2.35
CACNA1AO00555 AC055731.1-201ENST00000474387 401 ntBASIC0.37□□□□□ -2.35
CACNA1AO00555 RNA5SP180-201ENST00000516181 101 ntBASIC0.37□□□□□ -2.35
CACNA1AO00555 RNU6-1308P-201ENST00000516817 103 ntBASIC0.37□□□□□ -2.35
CACNA1AO00555 SNORA31.18-201ENST00000517043 134 ntBASIC0.37□□□□□ -2.35
CACNA1AO00555 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.37□□□□□ -2.35
CACNA1AO00555 RRN3P3-201ENST00000549207 578 ntBASIC0.37□□□□□ -2.35
CACNA1AO00555 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.37□□□□□ -2.35
CACNA1AO00555 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.37□□□□□ -2.35
CACNA1AO00555 MIR4529-201ENST00000578110 78 ntBASIC0.37□□□□□ -2.35
CACNA1AO00555 AL669831.4-202ENST00000590817 238 ntBASIC0.37□□□□□ -2.35
CACNA1AO00555 AC021749.1-201ENST00000604322 607 ntBASIC0.37□□□□□ -2.35
CACNA1AO00555 AL021997.1-201ENST00000605757 193 ntBASIC0.37□□□□□ -2.35
CACNA1AO00555 AC079395.3-201ENST00000615161 484 ntBASIC0.37□□□□□ -2.35
CACNA1AO00555 AL360181.4-201ENST00000621752 134 ntBASIC0.37□□□□□ -2.35
CACNA1AO00555 AP003476.1-201ENST00000623984 516 ntBASIC0.37□□□□□ -2.35
CACNA1AO00555 ZNF663P-202ENST00000641770 1131 ntBASIC0.37□□□□□ -2.35
CACNA1AO00555 RNU6-674P-201ENST00000363831 107 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms