Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC126389.1-201ENST00000477436 290 ntBASIC2.76□□□□□ -1.97
O00370 RPS29P20-201ENST00000489592 171 ntBASIC2.76□□□□□ -1.97
O00370 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.76□□□□□ -1.97
O00370 RPL39P36-201ENST00000490784 156 ntBASIC2.76□□□□□ -1.97
O00370 RPL9P6-201ENST00000492764 598 ntBASIC2.76□□□□□ -1.97
O00370 AC139453.3-201ENST00000493276 369 ntBASIC2.76□□□□□ -1.97
O00370 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
O00370 AC096725.1-201ENST00000514266 313 ntBASIC2.76□□□□□ -1.97
O00370 RNU6-914P-201ENST00000516749 109 ntBASIC2.76□□□□□ -1.97
O00370 SUB1P1-201ENST00000524415 382 ntBASIC2.76□□□□□ -1.97
O00370 RANP3-201ENST00000530970 276 ntBASIC2.76□□□□□ -1.97
O00370 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
O00370 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.76□□□□□ -1.97
O00370 AC024619.4-201ENST00000580924 316 ntBASIC2.76□□□□□ -1.97
O00370 AC025449.1-201ENST00000603896 529 ntBASIC2.76□□□□□ -1.97
O00370 MIR15A-201ENST00000607334 83 ntBASIC2.76□□□□□ -1.97
O00370 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.76□□□□□ -1.97
O00370 AL359547.2-201ENST00000615810 418 ntBASIC2.76□□□□□ -1.97
O00370 AC009161.2-201ENST00000624626 138 ntBASIC2.76□□□□□ -1.97
O00370 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.76□□□□□ -1.97
O00370 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
O00370 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
O00370 OR4G2P-201ENST00000328113 903 ntBASIC2.75□□□□□ -1.97
O00370 RNU6-1287P-201ENST00000362914 107 ntBASIC2.75□□□□□ -1.97
O00370 RNU6-461P-201ENST00000364195 107 ntBASIC2.75□□□□□ -1.97
O00370 RNU1-100P-201ENST00000365255 165 ntBASIC2.75□□□□□ -1.97
O00370 RNU6-61P-201ENST00000365528 109 ntBASIC2.75□□□□□ -1.97
O00370 RNU6-116P-201ENST00000384042 109 ntBASIC2.75□□□□□ -1.97
O00370 RNU6-74P-201ENST00000384235 107 ntBASIC2.75□□□□□ -1.97
O00370 RNU6-1060P-201ENST00000384664 107 ntBASIC2.75□□□□□ -1.97
O00370 Y_RNA.576-201ENST00000384781 102 ntBASIC2.75□□□□□ -1.97
O00370 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
O00370 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
O00370 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
O00370 AC080125.1-201ENST00000414888 684 ntBASIC2.75□□□□□ -1.97
O00370 MTCO1P21-201ENST00000416634 589 ntBASIC2.75□□□□□ -1.97
O00370 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.75□□□□□ -1.97
O00370 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.75□□□□□ -1.97
O00370 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.75□□□□□ -1.97
O00370 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.75□□□□□ -1.97
O00370 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.75□□□□□ -1.97
O00370 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.75□□□□□ -1.97
O00370 AC104806.1-201ENST00000508720 308 ntBASIC2.75□□□□□ -1.97
O00370 RNU6-314P-201ENST00000516574 104 ntBASIC2.75□□□□□ -1.97
O00370 RNA5SP503-201ENST00000517047 117 ntBASIC2.75□□□□□ -1.97
O00370 AC022634.1-201ENST00000520765 532 ntBASIC2.75□□□□□ -1.97
O00370 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
O00370 AC243972.3-201ENST00000539655 198 ntBASIC2.75□□□□□ -1.97
O00370 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.75□□□□□ -1.97
O00370 AL391646.1-201ENST00000603860 190 ntBASIC2.75□□□□□ -1.97
O00370 AC006023.1-201ENST00000603944 259 ntBASIC2.75□□□□□ -1.97
O00370 AC126118.1-201ENST00000607744 628 ntBASIC2.75□□□□□ -1.97
O00370 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
O00370 AL359740.1-201ENST00000624340 592 ntBASIC2.75□□□□□ -1.97
O00370 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.75□□□□□ -1.97
O00370 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.75□□□□□ -1.97
O00370 AL137003.2-201ENST00000606924 2538 ntBASIC2.75□□□□□ -1.97
O00370 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
O00370 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
O00370 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
O00370 ZNF680P1-201ENST00000436625 1469 ntBASIC2.74□□□□□ -1.97
O00370 Y_RNA.3-201ENST00000362331 103 ntBASIC2.74□□□□□ -1.97
O00370 Y_RNA.159-201ENST00000363674 87 ntBASIC2.74□□□□□ -1.97
O00370 RNU6-658P-201ENST00000384606 106 ntBASIC2.74□□□□□ -1.97
O00370 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.74□□□□□ -1.97
O00370 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.74□□□□□ -1.97
O00370 USP9YP20-201ENST00000419224 558 ntBASIC2.74□□□□□ -1.97
O00370 AL109913.1-201ENST00000421173 514 ntBASIC2.74□□□□□ -1.97
O00370 AL445687.1-201ENST00000439946 251 ntBASIC2.74□□□□□ -1.97
O00370 AC126182.1-201ENST00000478134 357 ntBASIC2.74□□□□□ -1.97
O00370 RPS27P27-201ENST00000498779 255 ntBASIC2.74□□□□□ -1.97
O00370 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.74□□□□□ -1.97
O00370 HMGB1P29-201ENST00000505659 499 ntBASIC2.74□□□□□ -1.97
O00370 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.74□□□□□ -1.97
O00370 RPL37P25-201ENST00000507308 276 ntBASIC2.74□□□□□ -1.97
O00370 AC091133.4-201ENST00000511142 308 ntBASIC2.74□□□□□ -1.97
O00370 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.74□□□□□ -1.97
O00370 MIR4672-201ENST00000583126 81 ntBASIC2.74□□□□□ -1.97
O00370 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.74□□□□□ -1.97
O00370 AC012507.3-201ENST00000603556 477 ntBASIC2.74□□□□□ -1.97
O00370 FTX_3.1-201ENST00000610451 147 ntBASIC2.74□□□□□ -1.97
O00370 AC139792.3-201ENST00000623525 224 ntBASIC2.74□□□□□ -1.97
O00370 AC098679.4-201ENST00000624241 654 ntBASIC2.74□□□□□ -1.97
O00370 SEPT14P19-203ENST00000633205 211 ntBASIC2.74□□□□□ -1.97
O00370 AC099654.12-201ENST00000639868 649 ntBASIC2.74□□□□□ -1.97
O00370 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.74□□□□□ -1.97
O00370 MTND4P35-201ENST00000604257 1375 ntBASIC2.74□□□□□ -1.97
O00370 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
O00370 ZNF271P-202ENST00000465539 1970 ntBASIC2.73□□□□□ -1.97
O00370 SNORD62.1-201ENST00000362541 86 ntBASIC2.73□□□□□ -1.97
O00370 SNORA68.1-201ENST00000364537 132 ntBASIC2.73□□□□□ -1.97
O00370 RNU6-1029P-201ENST00000384109 107 ntBASIC2.73□□□□□ -1.97
O00370 MIR454-201ENST00000390180 115 ntBASIC2.73□□□□□ -1.97
O00370 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.73□□□□□ -1.97
O00370 RNU2-49P-201ENST00000410666 184 ntBASIC2.73□□□□□ -1.97
O00370 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.73□□□□□ -1.97
O00370 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.73□□□□□ -1.97
O00370 MTCO3P30-201ENST00000426425 670 ntBASIC2.73□□□□□ -1.97
O00370 RPS15AP5-201ENST00000436276 388 ntBASIC2.73□□□□□ -1.97
O00370 CR769767.1-201ENST00000436337 346 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms