Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC103706.2-201ENST00000638080 240 ntBASIC1.61□□□□□ -2.15
UPK1AO00322 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.61□□□□□ -2.15
UPK1AO00322 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.61□□□□□ -2.15
UPK1AO00322 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
UPK1AO00322 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.6□□□□□ -2.15
UPK1AO00322 RNY4P24-201ENST00000362735 96 ntBASIC1.6□□□□□ -2.15
UPK1AO00322 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
UPK1AO00322 RNU6-1242P-201ENST00000391052 103 ntBASIC1.6□□□□□ -2.15
UPK1AO00322 AL133475.1-201ENST00000404414 305 ntBASIC1.6□□□□□ -2.15
UPK1AO00322 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.6□□□□□ -2.15
UPK1AO00322 EDDM3CP-201ENST00000415977 425 ntBASIC1.6□□□□□ -2.15
UPK1AO00322 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.6□□□□□ -2.15
UPK1AO00322 AL160275.3-201ENST00000423876 471 ntBASIC1.6□□□□□ -2.15
UPK1AO00322 RPL7P34-201ENST00000433316 712 ntBASIC1.6□□□□□ -2.15
UPK1AO00322 AL161788.1-201ENST00000441805 169 ntBASIC1.6□□□□□ -2.15
UPK1AO00322 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.6□□□□□ -2.15
UPK1AO00322 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.6□□□□□ -2.15
UPK1AO00322 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.6□□□□□ -2.15
UPK1AO00322 AC055731.1-201ENST00000474387 401 ntBASIC1.6□□□□□ -2.15
UPK1AO00322 MTND1P3-201ENST00000484956 952 ntBASIC1.6□□□□□ -2.15
UPK1AO00322 AC107032.1-201ENST00000485945 480 ntBASIC1.6□□□□□ -2.15
UPK1AO00322 AC104564.1-201ENST00000493028 407 ntBASIC1.6□□□□□ -2.15
UPK1AO00322 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.6□□□□□ -2.15
UPK1AO00322 SNORA31.19-201ENST00000517079 126 ntBASIC1.6□□□□□ -2.15
UPK1AO00322 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.6□□□□□ -2.15
UPK1AO00322 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.6□□□□□ -2.15
UPK1AO00322 AC084851.1-201ENST00000529105 249 ntBASIC1.6□□□□□ -2.15
UPK1AO00322 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.6□□□□□ -2.15
UPK1AO00322 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.6□□□□□ -2.15
UPK1AO00322 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
UPK1AO00322 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.6□□□□□ -2.15
UPK1AO00322 AL356432.3-201ENST00000568952 465 ntBASIC1.6□□□□□ -2.15
UPK1AO00322 MIR4529-201ENST00000578110 78 ntBASIC1.6□□□□□ -2.15
UPK1AO00322 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
UPK1AO00322 AL096840.1-201ENST00000603287 93 ntBASIC1.6□□□□□ -2.15
UPK1AO00322 AL358072.1-201ENST00000604156 575 ntBASIC1.6□□□□□ -2.15
UPK1AO00322 BCRP9-201ENST00000605312 388 ntBASIC1.6□□□□□ -2.15
UPK1AO00322 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.6□□□□□ -2.15
UPK1AO00322 AL627230.6-201ENST00000611129 280 ntBASIC1.6□□□□□ -2.15
UPK1AO00322 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.6□□□□□ -2.15
UPK1AO00322 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
UPK1AO00322 RNU6-433P-201ENST00000363216 104 ntBASIC1.59□□□□□ -2.15
UPK1AO00322 RNY3P13-201ENST00000365542 102 ntBASIC1.59□□□□□ -2.15
UPK1AO00322 Z98749.2-208ENST00000381646 500 ntBASIC1.59□□□□□ -2.15
UPK1AO00322 RNU6-906P-201ENST00000384700 70 ntBASIC1.59□□□□□ -2.15
UPK1AO00322 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.59□□□□□ -2.15
UPK1AO00322 AL591212.2-201ENST00000433923 257 ntBASIC1.59□□□□□ -2.15
UPK1AO00322 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
UPK1AO00322 AL078601.1-201ENST00000444542 271 ntBASIC1.59□□□□□ -2.15
UPK1AO00322 AC012308.1-201ENST00000451232 178 ntBASIC1.59□□□□□ -2.15
UPK1AO00322 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.59□□□□□ -2.15
UPK1AO00322 RNU6-295P-201ENST00000516901 104 ntBASIC1.59□□□□□ -2.15
UPK1AO00322 RNU6-677P-201ENST00000516914 101 ntBASIC1.59□□□□□ -2.15
UPK1AO00322 RNU2-19P-201ENST00000517288 84 ntBASIC1.59□□□□□ -2.15
UPK1AO00322 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.59□□□□□ -2.15
UPK1AO00322 AP000873.5-201ENST00000533906 236 ntBASIC1.59□□□□□ -2.15
UPK1AO00322 AC023050.2-201ENST00000544968 387 ntBASIC1.59□□□□□ -2.15
UPK1AO00322 AC079598.5-201ENST00000547460 117 ntBASIC1.59□□□□□ -2.15
UPK1AO00322 PSMA3P-201ENST00000555485 635 ntBASIC1.59□□□□□ -2.15
UPK1AO00322 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.59□□□□□ -2.15
UPK1AO00322 AC087045.1-201ENST00000605856 382 ntBASIC1.59□□□□□ -2.15
UPK1AO00322 AC068944.2-201ENST00000610373 403 ntBASIC1.59□□□□□ -2.15
UPK1AO00322 AC009269.6-201ENST00000621778 588 ntBASIC1.59□□□□□ -2.15
UPK1AO00322 AC091953.2-201ENST00000623979 160 ntBASIC1.59□□□□□ -2.15
UPK1AO00322 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.15
UPK1AO00322 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.59□□□□□ -2.16
UPK1AO00322 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.59□□□□□ -2.16
UPK1AO00322 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
UPK1AO00322 AC092104.1-201ENST00000497346 1441 ntBASIC1.58□□□□□ -2.16
UPK1AO00322 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.58□□□□□ -2.16
UPK1AO00322 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
UPK1AO00322 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
UPK1AO00322 FCF1P10-201ENST00000407590 479 ntBASIC1.58□□□□□ -2.16
UPK1AO00322 AC078974.1-201ENST00000411597 223 ntBASIC1.58□□□□□ -2.16
UPK1AO00322 POLHP1-201ENST00000411806 470 ntBASIC1.58□□□□□ -2.16
UPK1AO00322 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.58□□□□□ -2.16
UPK1AO00322 AC006366.1-201ENST00000422002 759 ntBASIC1.58□□□□□ -2.16
UPK1AO00322 AIMP1P2-201ENST00000425294 312 ntBASIC1.58□□□□□ -2.16
UPK1AO00322 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.58□□□□□ -2.16
UPK1AO00322 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.58□□□□□ -2.16
UPK1AO00322 AC084290.1-201ENST00000434995 374 ntBASIC1.58□□□□□ -2.16
UPK1AO00322 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.58□□□□□ -2.16
UPK1AO00322 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.58□□□□□ -2.16
UPK1AO00322 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.58□□□□□ -2.16
UPK1AO00322 RPL23AP42-201ENST00000471152 471 ntBASIC1.58□□□□□ -2.16
UPK1AO00322 AC117503.1-201ENST00000472241 394 ntBASIC1.58□□□□□ -2.16
UPK1AO00322 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.58□□□□□ -2.16
UPK1AO00322 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.58□□□□□ -2.16
UPK1AO00322 AC117522.2-201ENST00000510049 657 ntBASIC1.58□□□□□ -2.16
UPK1AO00322 MRPS17P9-201ENST00000511924 393 ntBASIC1.58□□□□□ -2.16
UPK1AO00322 RNU6-250P-201ENST00000516958 103 ntBASIC1.58□□□□□ -2.16
UPK1AO00322 AC105185.1-201ENST00000518705 535 ntBASIC1.58□□□□□ -2.16
UPK1AO00322 AC009902.1-201ENST00000519351 183 ntBASIC1.58□□□□□ -2.16
UPK1AO00322 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.58□□□□□ -2.16
UPK1AO00322 MIR3146-201ENST00000580367 79 ntBASIC1.58□□□□□ -2.16
UPK1AO00322 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.58□□□□□ -2.16
UPK1AO00322 AL670379.10-201ENST00000604330 253 ntBASIC1.58□□□□□ -2.16
UPK1AO00322 AL670379.9-201ENST00000605428 253 ntBASIC1.58□□□□□ -2.16
UPK1AO00322 AC096772.1-201ENST00000609146 564 ntBASIC1.58□□□□□ -2.16
UPK1AO00322 AC008121.3-201ENST00000618726 433 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms