Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.35□□□□□ -2.03
PDLIM1O00151 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.35□□□□□ -2.03
PDLIM1O00151 AL121821.2-201ENST00000556081 394 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.35□□□□□ -2.03
PDLIM1O00151 MIR1273C-201ENST00000578669 77 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.35□□□□□ -2.03
PDLIM1O00151 AC098848.2-201ENST00000588023 330 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 AC005261.5-201ENST00000596280 355 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 AC010620.1-201ENST00000601088 1102 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 AC245014.2-201ENST00000603689 287 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 AC246785.4-201ENST00000605374 287 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 AL139286.2-201ENST00000606838 396 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 AC245884.12-201ENST00000615364 59 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 AC024940.5-201ENST00000622889 474 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PDLIM1O00151 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
PDLIM1O00151 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
PDLIM1O00151 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PDLIM1O00151 Y_RNA.22-201ENST00000362492 102 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 Y_RNA.33-201ENST00000362591 102 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 MIR34A-201ENST00000385130 110 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 RNU2-52P-201ENST00000410680 190 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 RNA5SP111-201ENST00000411386 101 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.34□□□□□ -2.03
PDLIM1O00151 USP9YP29-201ENST00000445112 563 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 OSTCP8-201ENST00000445117 448 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 RNU7-26P-201ENST00000458980 63 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 AC090515.1-201ENST00000465295 476 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 AC126389.1-201ENST00000477436 290 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 RPS27P21-201ENST00000486977 252 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 AC026801.1-201ENST00000497178 464 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.34□□□□□ -2.03
PDLIM1O00151 AC116562.3-201ENST00000506136 177 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.34□□□□□ -2.03
PDLIM1O00151 SNORA31.19-201ENST00000517079 126 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 AC009902.1-201ENST00000519351 183 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.34□□□□□ -2.03
PDLIM1O00151 AC068587.5-201ENST00000528506 175 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 AP000873.5-201ENST00000533906 236 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
PDLIM1O00151 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.34□□□□□ -2.03
PDLIM1O00151 AC006199.1-201ENST00000548728 219 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 AL157871.3-201ENST00000557231 293 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 AL138976.2-201ENST00000563989 694 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.34□□□□□ -2.03
PDLIM1O00151 MIR4672-201ENST00000583126 81 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.34□□□□□ -2.03
PDLIM1O00151 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.34□□□□□ -2.03
PDLIM1O00151 AC119751.7-201ENST00000600494 245 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 AL670379.4-201ENST00000605279 254 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 AC087752.4-201ENST00000605911 462 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 AL121992.2-201ENST00000606262 256 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 AC126118.1-201ENST00000607744 628 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 SCARNA15.3-201ENST00000626315 122 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 SCARNA4.1-201ENST00000628597 123 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 KPNA2P1-201ENST00000458289 1591 ntBASIC2.34□□□□□ -2.03
PDLIM1O00151 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
PDLIM1O00151 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
PDLIM1O00151 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
PDLIM1O00151 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PDLIM1O00151 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.33□□□□□ -2.04
PDLIM1O00151 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PDLIM1O00151 MIR21-201ENST00000362134 72 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 RNU6-179P-201ENST00000363350 107 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
PDLIM1O00151 CISD1P1-201ENST00000393907 327 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 RNU6-248P-201ENST00000410720 107 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 RNU2-40P-201ENST00000410833 196 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.33□□□□□ -2.04
PDLIM1O00151 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.33□□□□□ -2.04
PDLIM1O00151 MTATP6P16-201ENST00000434543 526 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.33□□□□□ -2.04
PDLIM1O00151 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.33□□□□□ -2.04
PDLIM1O00151 AL353706.1-201ENST00000436728 494 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.33□□□□□ -2.04
PDLIM1O00151 AL161651.1-201ENST00000440882 223 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 KATNBL1P3-201ENST00000443475 909 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.33□□□□□ -2.04
PDLIM1O00151 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.33□□□□□ -2.04
PDLIM1O00151 AC022493.1-201ENST00000492984 337 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 GZMAP1-201ENST00000503054 631 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 SCARNA17.1-201ENST00000516211 143 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 RNU6-581P-201ENST00000516214 105 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 SCARNA17.2-201ENST00000516334 143 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 RNU6-410P-201ENST00000517006 107 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 AC090572.1-201ENST00000519251 160 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.33□□□□□ -2.04
PDLIM1O00151 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.33□□□□□ -2.04
PDLIM1O00151 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
PDLIM1O00151 LINC00933-203ENST00000559812 219 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.33□□□□□ -2.04
PDLIM1O00151 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.33□□□□□ -2.04
PDLIM1O00151 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.33□□□□□ -2.04
PDLIM1O00151 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.33□□□□□ -2.04
PDLIM1O00151 AC110760.3-201ENST00000598794 467 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 AC007938.3-201ENST00000604965 623 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 Z84480.1-201ENST00000605131 311 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 AC012409.4-201ENST00000612923 249 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms