Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC0.33□□□□□ -2.36
CHKB-CPT1BH3BT56 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.33□□□□□ -2.36
CHKB-CPT1BH3BT56 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.33□□□□□ -2.36
CHKB-CPT1BH3BT56 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.33□□□□□ -2.36
CHKB-CPT1BH3BT56 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.33□□□□□ -2.36
CHKB-CPT1BH3BT56 MIR4698-201ENST00000577795 80 ntBASIC0.33□□□□□ -2.36
CHKB-CPT1BH3BT56 MIR3169-201ENST00000578032 83 ntBASIC0.33□□□□□ -2.36
CHKB-CPT1BH3BT56 AC022387.2-201ENST00000604050 448 ntBASIC0.33□□□□□ -2.36
CHKB-CPT1BH3BT56 BNIP3P10-201ENST00000605360 577 ntBASIC0.33□□□□□ -2.36
CHKB-CPT1BH3BT56 AC096772.1-201ENST00000609146 564 ntBASIC0.33□□□□□ -2.36
CHKB-CPT1BH3BT56 AC004009.2-201ENST00000623016 728 ntBASIC0.33□□□□□ -2.36
CHKB-CPT1BH3BT56 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.33□□□□□ -2.36
CHKB-CPT1BH3BT56 AC095038.3-201ENST00000634439 195 ntBASIC0.33□□□□□ -2.36
CHKB-CPT1BH3BT56 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
CHKB-CPT1BH3BT56 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 Y_RNA.255-201ENST00000364581 97 ntBASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 RNU6-658P-201ENST00000384606 106 ntBASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 MIR7-1-201ENST00000384871 110 ntBASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 RNU11-5P-201ENST00000391216 129 ntBASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 RNU2-68P-201ENST00000410878 191 ntBASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 Z92545.1-201ENST00000411782 234 ntBASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 RPS26P5-201ENST00000418544 335 ntBASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 AL589872.1-201ENST00000426602 288 ntBASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 AL669831.1-202ENST00000428504 417 ntBASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 C8orf59P1-201ENST00000429930 303 ntBASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 CBX3P6-201ENST00000430257 527 ntBASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 MTND2P5-201ENST00000432656 1006 ntBASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 AC013267.1-201ENST00000458227 267 ntBASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 BET1P1-201ENST00000482276 359 ntBASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 AL163195.1-201ENST00000496941 348 ntBASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 MTCYBP43-201ENST00000513621 740 ntBASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 AC093249.1-201ENST00000567049 203 ntBASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 AL590396.4-201ENST00000636779 956 ntBASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 MTCO1P9-201ENST00000505577 1534 ntBASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
CHKB-CPT1BH3BT56 SGO1P1-201ENST00000603525 1447 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 RNU6-252P-201ENST00000363232 107 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 RNU6-819P-201ENST00000364116 107 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 SNORD116-23-201ENST00000384645 92 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 MIR16-1-201ENST00000385271 89 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 RNU6-360P-201ENST00000390944 104 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 RNA5SP171-201ENST00000391071 115 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 AC016769.2-201ENST00000414815 475 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 FTH1P12-201ENST00000432137 551 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 AC010153.1-201ENST00000432862 727 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 SNRPFP4-201ENST00000456366 242 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 COX6CP6-201ENST00000490840 228 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 RPS29P21-201ENST00000496272 170 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 PDCD5P2-201ENST00000507570 312 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 AC116337.1-201ENST00000509680 687 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 RNU5B-3P-201ENST00000516601 115 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 RN7SKP88-201ENST00000516847 250 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 RNU6-1092P-201ENST00000516955 87 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 AP001004.1-201ENST00000582468 324 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 AC105129.3-201ENST00000605455 485 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 AL158211.4-201ENST00000606988 584 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 MIR92B-201ENST00000607575 96 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 AC004908.3-201ENST00000610248 625 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 7SK.8-201ENST00000612110 250 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 7SK.11-201ENST00000615477 250 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 MIR6835-201ENST00000621552 64 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 7SK.13-201ENST00000622040 250 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 AC022513.1-201ENST00000624512 117 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 AC026634.1-201ENST00000634369 198 ntBASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
CHKB-CPT1BH3BT56 AC092447.10-201ENST00000620607 1652 ntBASIC0.3□□□□□ -2.36
CHKB-CPT1BH3BT56 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CHKB-CPT1BH3BT56 RNA5SP493-201ENST00000364115 91 ntBASIC0.3□□□□□ -2.36
CHKB-CPT1BH3BT56 SNORD114-24-201ENST00000365029 72 ntBASIC0.3□□□□□ -2.36
CHKB-CPT1BH3BT56 RNU6-1274P-201ENST00000384557 107 ntBASIC0.3□□□□□ -2.36
CHKB-CPT1BH3BT56 AL021407.1-201ENST00000404531 386 ntBASIC0.3□□□□□ -2.36
CHKB-CPT1BH3BT56 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC0.3□□□□□ -2.36
CHKB-CPT1BH3BT56 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.3□□□□□ -2.36
CHKB-CPT1BH3BT56 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.3□□□□□ -2.36
CHKB-CPT1BH3BT56 AL591043.1-201ENST00000432461 424 ntBASIC0.3□□□□□ -2.36
CHKB-CPT1BH3BT56 RPL23AP23-201ENST00000452590 471 ntBASIC0.3□□□□□ -2.36
CHKB-CPT1BH3BT56 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.3□□□□□ -2.36
CHKB-CPT1BH3BT56 AC010460.2-201ENST00000509054 677 ntBASIC0.3□□□□□ -2.36
CHKB-CPT1BH3BT56 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms