Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 MIR412-201ENST00000362142 91 ntBASIC4.86□□□□□ -1.63
H3BM21 SNORD114-19-201ENST00000363072 75 ntBASIC4.86□□□□□ -1.63
H3BM21 RNU4-10P-201ENST00000364383 140 ntBASIC4.86□□□□□ -1.63
H3BM21 MIR301A-201ENST00000385261 86 ntBASIC4.86□□□□□ -1.63
H3BM21 HLFP1-201ENST00000402375 499 ntBASIC4.86□□□□□ -1.63
H3BM21 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.86□□□□□ -1.63
H3BM21 RN7SKP100-201ENST00000411258 284 ntBASIC4.86□□□□□ -1.63
H3BM21 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.86□□□□□ -1.63
H3BM21 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.86□□□□□ -1.63
H3BM21 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.86□□□□□ -1.63
H3BM21 RNU6-377P-201ENST00000515965 102 ntBASIC4.86□□□□□ -1.63
H3BM21 AC008489.1-201ENST00000524271 483 ntBASIC4.86□□□□□ -1.63
H3BM21 AP006289.1-201ENST00000538089 277 ntBASIC4.86□□□□□ -1.63
H3BM21 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.86□□□□□ -1.63
H3BM21 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.86□□□□□ -1.63
H3BM21 AC004832.5-201ENST00000608677 401 ntBASIC4.86□□□□□ -1.63
H3BM21 MIR6780A-201ENST00000615089 68 ntBASIC4.86□□□□□ -1.63
H3BM21 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.86□□□□□ -1.63
H3BM21 MIR6864-201ENST00000617935 70 ntBASIC4.86□□□□□ -1.63
H3BM21 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
H3BM21 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
H3BM21 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
H3BM21 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
H3BM21 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
H3BM21 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
H3BM21 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
H3BM21 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.85□□□□□ -1.63
H3BM21 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.85□□□□□ -1.63
H3BM21 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
H3BM21 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
H3BM21 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
H3BM21 SNORD14B-201ENST00000364533 90 ntBASIC4.85□□□□□ -1.63
H3BM21 RNU6-336P-201ENST00000364891 107 ntBASIC4.85□□□□□ -1.63
H3BM21 MIR626-201ENST00000385032 94 ntBASIC4.85□□□□□ -1.63
H3BM21 BX510359.2-201ENST00000417920 305 ntBASIC4.85□□□□□ -1.63
H3BM21 PPP1R11P2-201ENST00000423543 382 ntBASIC4.85□□□□□ -1.63
H3BM21 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.85□□□□□ -1.63
H3BM21 AC090774.1-201ENST00000435925 246 ntBASIC4.85□□□□□ -1.63
H3BM21 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.85□□□□□ -1.63
H3BM21 RPL35AP21-201ENST00000437667 333 ntBASIC4.85□□□□□ -1.63
H3BM21 AURKAPS2-201ENST00000454983 333 ntBASIC4.85□□□□□ -1.63
H3BM21 RN7SL481P-201ENST00000477764 299 ntBASIC4.85□□□□□ -1.63
H3BM21 AC012158.1-204ENST00000483430 465 ntBASIC4.85□□□□□ -1.63
H3BM21 AC073073.1-201ENST00000493920 463 ntBASIC4.85□□□□□ -1.63
H3BM21 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.85□□□□□ -1.63
H3BM21 SCARNA8-201ENST00000515924 131 ntBASIC4.85□□□□□ -1.63
H3BM21 RNU6-453P-201ENST00000516819 85 ntBASIC4.85□□□□□ -1.63
H3BM21 RNU6-143P-201ENST00000516942 93 ntBASIC4.85□□□□□ -1.63
H3BM21 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.85□□□□□ -1.63
H3BM21 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.85□□□□□ -1.63
H3BM21 UBL5P4-201ENST00000562584 236 ntBASIC4.85□□□□□ -1.63
H3BM21 AL391813.1-201ENST00000603098 260 ntBASIC4.85□□□□□ -1.63
H3BM21 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.85□□□□□ -1.63
H3BM21 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.85□□□□□ -1.63
H3BM21 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
H3BM21 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.85□□□□□ -1.63
H3BM21 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
H3BM21 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
H3BM21 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.85□□□□□ -1.63
H3BM21 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
H3BM21 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.84□□□□□ -1.63
H3BM21 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
H3BM21 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.84□□□□□ -1.63
H3BM21 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
H3BM21 AL672167.1-204ENST00000641875 3017 ntBASIC4.84□□□□□ -1.63
H3BM21 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
H3BM21 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
H3BM21 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.84□□□□□ -1.63
H3BM21 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.84□□□□□ -1.63
H3BM21 AC079741.1-201ENST00000321498 212 ntBASIC4.84□□□□□ -1.63
H3BM21 RNA5SP52-201ENST00000362448 134 ntBASIC4.84□□□□□ -1.63
H3BM21 Y_RNA.101-201ENST00000363154 102 ntBASIC4.84□□□□□ -1.63
H3BM21 RNU6-106P-201ENST00000384405 107 ntBASIC4.84□□□□□ -1.63
H3BM21 Y_RNA.521-201ENST00000384560 114 ntBASIC4.84□□□□□ -1.63
H3BM21 SNORA8.3-201ENST00000384679 139 ntBASIC4.84□□□□□ -1.63
H3BM21 MIR135A2-201ENST00000384854 100 ntBASIC4.84□□□□□ -1.63
H3BM21 SNORA11-201ENST00000408789 128 ntBASIC4.84□□□□□ -1.63
H3BM21 AC114755.2-201ENST00000413520 361 ntBASIC4.84□□□□□ -1.63
H3BM21 AC092447.6-201ENST00000414578 210 ntBASIC4.84□□□□□ -1.63
H3BM21 AC104333.2-201ENST00000422630 192 ntBASIC4.84□□□□□ -1.63
H3BM21 AC011753.3-201ENST00000443436 406 ntBASIC4.84□□□□□ -1.63
H3BM21 AL158147.1-201ENST00000443970 75 ntBASIC4.84□□□□□ -1.63
H3BM21 RPS17P2-201ENST00000461663 408 ntBASIC4.84□□□□□ -1.63
H3BM21 AF186996.7-201ENST00000492781 209 ntBASIC4.84□□□□□ -1.63
H3BM21 RN7SKP276-201ENST00000516242 268 ntBASIC4.84□□□□□ -1.63
H3BM21 snoMBII-202.2-201ENST00000517263 86 ntBASIC4.84□□□□□ -1.63
H3BM21 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.84□□□□□ -1.63
H3BM21 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.84□□□□□ -1.63
H3BM21 AL357075.2-201ENST00000614906 189 ntBASIC4.84□□□□□ -1.63
H3BM21 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
H3BM21 AP000346.3-201ENST00000622821 210 ntBASIC4.84□□□□□ -1.63
H3BM21 MIR7641-1-201ENST00000627518 61 ntBASIC4.84□□□□□ -1.63
H3BM21 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
H3BM21 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
H3BM21 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
H3BM21 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.84□□□□□ -1.63
H3BM21 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
H3BM21 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
H3BM21 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.84□□□□□ -1.64
H3BM21 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms