Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.81□□□□□ -2.28
TRBV27A0A0K0K1C4 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.81□□□□□ -2.28
TRBV27A0A0K0K1C4 AC109329.1-201ENST00000518744 317 ntBASIC0.81□□□□□ -2.28
TRBV27A0A0K0K1C4 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.81□□□□□ -2.28
TRBV27A0A0K0K1C4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.81□□□□□ -2.28
TRBV27A0A0K0K1C4 AC090115.3-201ENST00000553218 849 ntBASIC0.81□□□□□ -2.28
TRBV27A0A0K0K1C4 AC096772.1-201ENST00000609146 564 ntBASIC0.81□□□□□ -2.28
TRBV27A0A0K0K1C4 AC004908.3-201ENST00000610248 625 ntBASIC0.81□□□□□ -2.28
TRBV27A0A0K0K1C4 AL132822.1-201ENST00000617063 513 ntBASIC0.81□□□□□ -2.28
TRBV27A0A0K0K1C4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.81□□□□□ -2.28
TRBV27A0A0K0K1C4 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.81□□□□□ -2.28
TRBV27A0A0K0K1C4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 AL139397.2-201ENST00000404529 772 ntBASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 MIR1267-201ENST00000408723 78 ntBASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 AL158050.1-201ENST00000416077 457 ntBASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 AL022400.1-201ENST00000423946 935 ntBASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 RPS27P16-201ENST00000425758 201 ntBASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 AC092648.1-201ENST00000425870 423 ntBASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 RPL7P55-201ENST00000450522 746 ntBASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 RNU6-775P-201ENST00000459318 96 ntBASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 AC023194.1-201ENST00000493084 308 ntBASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 AC119751.5-201ENST00000514077 770 ntBASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 RNU7-40P-201ENST00000516397 64 ntBASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 AC136619.2-201ENST00000563361 631 ntBASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 AC012414.6-201ENST00000568241 401 ntBASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 AC073410.2-201ENST00000603240 332 ntBASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 AC123912.5-201ENST00000605470 343 ntBASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 AC013470.4-201ENST00000619978 986 ntBASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 AC097655.1-201ENST00000635075 318 ntBASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 MTND5P9-201ENST00000503854 1755 ntBASIC0.8□□□□□ -2.28
TRBV27A0A0K0K1C4 AP000560.1-201ENST00000624150 1937 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 SNORD114-19-201ENST00000363072 75 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 RNU6-512P-201ENST00000364438 103 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 RNU4-91P-201ENST00000364778 135 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 RNU6-1274P-201ENST00000384557 107 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 RNU4-27P-201ENST00000410889 139 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 TPMTP2-201ENST00000414372 726 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 OR6C66P-201ENST00000414917 930 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 USP9YP26-201ENST00000421008 661 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 CR848007.2-201ENST00000424918 787 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 USP9YP18-201ENST00000425912 695 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 HMGB1P27-201ENST00000431429 603 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 DYNLT3P2-201ENST00000442517 295 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 MTATP6P30-201ENST00000443540 664 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 USP9YP17-201ENST00000444617 696 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 AC010409.1-201ENST00000487382 476 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 AL133373.1-201ENST00000497098 94 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 AC006518.2-201ENST00000542513 940 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 AC044913.1-201ENST00000557200 430 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 MIR4421-201ENST00000578133 69 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 DPPA3P3-201ENST00000603842 430 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 AC103810.9-201ENST00000606688 112 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 AC243773.3-201ENST00000613270 256 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 AL357080.1-201ENST00000617394 239 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 AC253576.2-201ENST00000618815 580 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.79□□□□□ -2.28
TRBV27A0A0K0K1C4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 Y_RNA.111-201ENST00000363248 100 ntBASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 RNU6-414P-201ENST00000363705 104 ntBASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 RNU6-343P-201ENST00000364709 104 ntBASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 SNORA70.7-201ENST00000384159 133 ntBASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 RNU6-1207P-201ENST00000384343 107 ntBASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 MIR513A1-201ENST00000385138 129 ntBASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 AC104058.1-201ENST00000448028 297 ntBASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 RNU2-53P-201ENST00000516257 147 ntBASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 SNORA76.2-201ENST00000517095 137 ntBASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 AC084364.2-201ENST00000546924 395 ntBASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 AC027807.1-201ENST00000559921 996 ntBASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 MIR4789-201ENST00000577469 82 ntBASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 MIR4782-201ENST00000577987 79 ntBASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 SNORA77B-201ENST00000578179 125 ntBASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 MIR4295-201ENST00000585286 85 ntBASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.78□□□□□ -2.28
TRBV27A0A0K0K1C4 HSPE1P19-201ENST00000603327 295 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms