Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 AC032011.1-201ENST00000611703 1549 ntBASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC163A0A0D9SF12 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 AC007823.1-201ENST00000569932 1566 ntBASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 AL353746.1-201ENST00000566293 6881 ntBASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 Y_RNA.48-201ENST00000362710 103 ntBASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 Y_RNA.326-201ENST00000365176 113 ntBASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 RNU6-1280P-201ENST00000365211 107 ntBASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 AL138878.1-201ENST00000405131 347 ntBASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 USMG5P1-201ENST00000425964 177 ntBASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 AC087650.1-201ENST00000431445 468 ntBASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 AL353748.1-201ENST00000440753 474 ntBASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 MTCYBP6-201ENST00000441810 138 ntBASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 U8.21-201ENST00000459536 136 ntBASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 RPL21P11-201ENST00000461458 483 ntBASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 AL133162.1-201ENST00000463228 453 ntBASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 AC133134.1-201ENST00000466800 359 ntBASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 Y_RNA.661-201ENST00000516003 99 ntBASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 RNU6-581P-201ENST00000516214 105 ntBASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 RNA5SP179-201ENST00000517284 121 ntBASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 AL391261.3-201ENST00000557194 520 ntBASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 AC091167.4-201ENST00000605079 184 ntBASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 AC015813.4-201ENST00000610469 179 ntBASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 AC097372.5-201ENST00000623665 376 ntBASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 AL732372.2-225ENST00000642124 456 ntBASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 MTND5P7-201ENST00000413558 1798 ntBASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC163A0A0D9SF12 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 RNU6-78P-201ENST00000362897 107 ntBASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 RNU6-842P-201ENST00000384269 107 ntBASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 AL139247.1-201ENST00000422768 325 ntBASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 AL591419.1-201ENST00000427423 339 ntBASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 AC005300.1-201ENST00000428401 373 ntBASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 AP000907.1-201ENST00000428428 510 ntBASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 MTND3P9-201ENST00000429526 346 ntBASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 HMGN2P31-201ENST00000432430 273 ntBASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 AC125238.1-201ENST00000448842 249 ntBASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 AC010099.1-201ENST00000455434 375 ntBASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 Y_RNA.639-201ENST00000458981 102 ntBASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 FO393415.2-201ENST00000480085 343 ntBASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 AC090096.1-201ENST00000489168 390 ntBASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 RNU6-120P-201ENST00000516077 103 ntBASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 RNU6-264P-201ENST00000517134 104 ntBASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 AP004607.1-201ENST00000524456 203 ntBASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 AC018889.1-201ENST00000605372 397 ntBASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 U3.45-201ENST00000607547 219 ntBASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 AL138880.2-201ENST00000616214 239 ntBASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 AC140113.4-201ENST00000622087 222 ntBASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 MTND5P1-201ENST00000445440 1375 ntBASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC163A0A0D9SF12 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.96□□□□□ -1.77
CCDC163A0A0D9SF12 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.96□□□□□ -1.77
CCDC163A0A0D9SF12 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
CCDC163A0A0D9SF12 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC163A0A0D9SF12 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC163A0A0D9SF12 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
CCDC163A0A0D9SF12 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC163A0A0D9SF12 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CCDC163A0A0D9SF12 AL117339.3-201ENST00000418733 162 ntBASIC3.96□□□□□ -1.78
CCDC163A0A0D9SF12 AL133396.1-201ENST00000432048 687 ntBASIC3.96□□□□□ -1.78
CCDC163A0A0D9SF12 RN7SL330P-201ENST00000469709 307 ntBASIC3.96□□□□□ -1.78
CCDC163A0A0D9SF12 AC106707.2-201ENST00000484182 374 ntBASIC3.96□□□□□ -1.78
CCDC163A0A0D9SF12 PTP4A1P4-201ENST00000512479 322 ntBASIC3.96□□□□□ -1.78
CCDC163A0A0D9SF12 RNA5SP164-201ENST00000516533 110 ntBASIC3.96□□□□□ -1.78
CCDC163A0A0D9SF12 SNRPGP18-201ENST00000553000 214 ntBASIC3.96□□□□□ -1.78
CCDC163A0A0D9SF12 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.96□□□□□ -1.78
CCDC163A0A0D9SF12 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms