Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 AC107016.2-201ENST00000547968 190 ntBASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 RPL23AP84-201ENST00000571193 464 ntBASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 uc_338.11-201ENST00000619132 160 ntBASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 AC006386.2-201ENST00000624491 75 ntBASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 AC012005.1-201ENST00000624575 75 ntBASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 AL355596.1-201ENST00000565399 3996 ntBASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 Y_RNA.86-201ENST00000363020 111 ntBASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 RNA5SP139-201ENST00000364340 117 ntBASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 RNU6-851P-201ENST00000384565 107 ntBASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 RNU6-550P-201ENST00000391057 101 ntBASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 RNU6-332P-201ENST00000391193 108 ntBASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 RNU6-1148P-201ENST00000410992 104 ntBASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 Z85995.1-201ENST00000415547 335 ntBASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 RPL7P10-201ENST00000417407 739 ntBASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 ATG3P1-201ENST00000419507 911 ntBASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 AC104332.2-201ENST00000429959 156 ntBASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 AL121601.2-201ENST00000438019 707 ntBASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 MTND5P20-201ENST00000448677 143 ntBASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 MTND3P10-201ENST00000450967 341 ntBASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 AC087588.1-201ENST00000462203 316 ntBASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 RNU6-123P-201ENST00000516163 102 ntBASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 SCARNA15.2-201ENST00000516409 127 ntBASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 Y_RNA.689-201ENST00000516589 107 ntBASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 EIF4BP1-201ENST00000554881 351 ntBASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 AC106782.4-201ENST00000568264 210 ntBASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 LARP7P3-201ENST00000579888 337 ntBASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 BNIP3P9-201ENST00000603714 553 ntBASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 NUTF2P8-201ENST00000604593 363 ntBASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 HSPE1P7-201ENST00000604681 321 ntBASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 AC069234.5-201ENST00000611056 416 ntBASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 AC012409.4-201ENST00000612923 249 ntBASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.12□□□□□ -1.91
SNX9Q9Y5X1 OR4G1P-203ENST00000641984 1631 ntBASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 AL035425.3-201ENST00000564206 4996 ntBASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 Y_RNA.160-201ENST00000363677 92 ntBASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 RN7SKP58-201ENST00000411010 305 ntBASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 RNU6-387P-201ENST00000411331 105 ntBASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 OR6C66P-201ENST00000414917 930 ntBASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 RPL21P111-201ENST00000418453 477 ntBASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 RPL7L1P10-201ENST00000427790 463 ntBASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 RPS24P13-201ENST00000442520 397 ntBASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 HMGN2P26-201ENST00000463169 339 ntBASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 HMGN1P12-201ENST00000499125 195 ntBASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 AC091951.2-201ENST00000500762 203 ntBASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 CCDC34P1-201ENST00000507441 517 ntBASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 CENPUP1-201ENST00000526649 1202 ntBASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 MIR5583-1-201ENST00000580941 59 ntBASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 MIR3609-201ENST00000582661 80 ntBASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 BNIP3P10-201ENST00000605360 577 ntBASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 LARP7P1-201ENST00000605576 316 ntBASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 RNU6-89P-201ENST00000606519 100 ntBASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 AC130324.3-201ENST00000614165 542 ntBASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 AC034102.8-201ENST00000615146 484 ntBASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 U6.114-201ENST00000636407 96 ntBASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 AP003122.5-201ENST00000527668 3766 ntBASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SNX9Q9Y5X1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SNX9Q9Y5X1 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SNX9Q9Y5X1 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SNX9Q9Y5X1 NACAP2-201ENST00000318548 624 ntBASIC3.1□□□□□ -1.91
SNX9Q9Y5X1 Y_RNA.167-201ENST00000363735 109 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms