Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 RNVU1-4-201ENST00000612985 164 ntBASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 AC093913.1-201ENST00000614178 329 ntBASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 AC009033.1-201ENST00000624279 431 ntBASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 HSPA8P1-201ENST00000425843 1833 ntBASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 RNU4-35P-201ENST00000362588 141 ntBASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 SNORD113-7-201ENST00000363762 77 ntBASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 RNU5E-7P-201ENST00000365290 117 ntBASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 AL162578.1-201ENST00000406202 378 ntBASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 AL096701.2-201ENST00000416920 238 ntBASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 AC009414.1-201ENST00000427200 443 ntBASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 NDUFA5P4-201ENST00000436704 385 ntBASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 AL357552.1-201ENST00000445254 415 ntBASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 AP000852.1-201ENST00000472460 573 ntBASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 AC006483.1-201ENST00000487308 313 ntBASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 RNU6-1069P-201ENST00000516612 133 ntBASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 AC109479.2-201ENST00000517842 174 ntBASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 AC018638.8-201ENST00000588755 281 ntBASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 RPL23AP78-201ENST00000599928 470 ntBASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 APOOP1-201ENST00000604695 592 ntBASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 AL357078.3-201ENST00000607528 618 ntBASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 AL355365.1-201ENST00000616480 294 ntBASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 AC090617.10-201ENST00000624308 134 ntBASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 CASC19-280ENST00000642102 1351 ntBASIC3.88□□□□□ -1.79
COL4A3BPQ9Y5P4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 Y_RNA.72-201ENST00000362894 103 ntBASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 Y_RNA.86-201ENST00000363020 111 ntBASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 Y_RNA.167-201ENST00000363735 109 ntBASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 RNU6-1283P-201ENST00000365314 105 ntBASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 SNORD17-201ENST00000390930 237 ntBASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 AL356776.1-201ENST00000406574 447 ntBASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 AC012308.1-201ENST00000451232 178 ntBASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 AC107626.1-201ENST00000471084 183 ntBASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 AC018710.1-201ENST00000506509 158 ntBASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 AC074250.1-201ENST00000511117 192 ntBASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 AC025465.4-201ENST00000513422 638 ntBASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 ACA59.2-201ENST00000517061 156 ntBASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 PSMA3P-201ENST00000555485 635 ntBASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 MIR4425-201ENST00000580572 84 ntBASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 OR1M4P-201ENST00000589199 287 ntBASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 AL391813.1-201ENST00000603098 260 ntBASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 AC091152.3-201ENST00000604227 325 ntBASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 ZNF519P1-201ENST00000449011 1626 ntBASIC3.87□□□□□ -1.79
COL4A3BPQ9Y5P4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 RNU6-858P-201ENST00000362436 107 ntBASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 RNA5SP387-201ENST00000364226 106 ntBASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 RNU6-748P-201ENST00000384648 107 ntBASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 MIR147B-201ENST00000390185 80 ntBASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 SNORA48.8-201ENST00000391324 134 ntBASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 Z98941.1-201ENST00000407764 100 ntBASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 AC017079.2-201ENST00000416102 485 ntBASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 RPL30P16-201ENST00000419341 429 ntBASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 AC097713.2-201ENST00000430199 356 ntBASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 OSTCP8-201ENST00000445117 448 ntBASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 AC008155.2-201ENST00000464337 397 ntBASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 FAM206BP-201ENST00000510179 541 ntBASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 SNORA70.19-201ENST00000516717 90 ntBASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 RNU6-1314P-201ENST00000517139 104 ntBASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 AC090136.1-201ENST00000520009 240 ntBASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 RNU6-323P-201ENST00000521915 107 ntBASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 TGIF1P1-201ENST00000558095 802 ntBASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 AC020895.1-201ENST00000595362 272 ntBASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 AC024153.1-201ENST00000603103 365 ntBASIC3.86□□□□□ -1.79
COL4A3BPQ9Y5P4 AC007179.3-201ENST00000604976 235 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms