Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 AL603758.1-201ENST00000618654 241 ntBASIC1.69□□□□□ -2.14
SHANK1Q9Y566 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.69□□□□□ -2.14
SHANK1Q9Y566 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.69□□□□□ -2.14
SHANK1Q9Y566 AC009487.4-201ENST00000624969 3585 ntBASIC1.69□□□□□ -2.14
SHANK1Q9Y566 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SHANK1Q9Y566 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SHANK1Q9Y566 AL049641.1-201ENST00000441055 1948 ntBASIC1.69□□□□□ -2.14
SHANK1Q9Y566 RNU5F-7P-201ENST00000363696 115 ntBASIC1.69□□□□□ -2.14
SHANK1Q9Y566 Y_RNA.191-201ENST00000363972 113 ntBASIC1.69□□□□□ -2.14
SHANK1Q9Y566 RNU5E-6P-201ENST00000365574 115 ntBASIC1.69□□□□□ -2.14
SHANK1Q9Y566 FCF1P10-201ENST00000407590 479 ntBASIC1.69□□□□□ -2.14
SHANK1Q9Y566 RNU2-8P-201ENST00000410727 190 ntBASIC1.69□□□□□ -2.14
SHANK1Q9Y566 RNA5SP38-201ENST00000410750 119 ntBASIC1.69□□□□□ -2.14
SHANK1Q9Y566 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.69□□□□□ -2.14
SHANK1Q9Y566 RPS15AP12-201ENST00000419498 388 ntBASIC1.69□□□□□ -2.14
SHANK1Q9Y566 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.69□□□□□ -2.14
SHANK1Q9Y566 HMGN2P30-201ENST00000423237 256 ntBASIC1.69□□□□□ -2.14
SHANK1Q9Y566 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.69□□□□□ -2.14
SHANK1Q9Y566 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.69□□□□□ -2.14
SHANK1Q9Y566 AL591704.1-201ENST00000432574 275 ntBASIC1.69□□□□□ -2.14
SHANK1Q9Y566 AC009961.2-201ENST00000435771 251 ntBASIC1.69□□□□□ -2.14
SHANK1Q9Y566 AC090774.1-201ENST00000435925 246 ntBASIC1.69□□□□□ -2.14
SHANK1Q9Y566 MTATP6P30-201ENST00000443540 664 ntBASIC1.69□□□□□ -2.14
SHANK1Q9Y566 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.69□□□□□ -2.14
SHANK1Q9Y566 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.69□□□□□ -2.14
SHANK1Q9Y566 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.69□□□□□ -2.14
SHANK1Q9Y566 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.69□□□□□ -2.14
SHANK1Q9Y566 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC1.69□□□□□ -2.14
SHANK1Q9Y566 SYF2P1-201ENST00000550658 413 ntBASIC1.69□□□□□ -2.14
SHANK1Q9Y566 RPL21P5-201ENST00000554662 472 ntBASIC1.69□□□□□ -2.14
SHANK1Q9Y566 MIR3167-201ENST00000579623 85 ntBASIC1.69□□□□□ -2.14
SHANK1Q9Y566 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.69□□□□□ -2.14
SHANK1Q9Y566 AC121247.2-201ENST00000604776 136 ntBASIC1.69□□□□□ -2.14
SHANK1Q9Y566 AC084768.2-201ENST00000622736 221 ntBASIC1.69□□□□□ -2.14
SHANK1Q9Y566 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
SHANK1Q9Y566 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.68□□□□□ -2.14
SHANK1Q9Y566 FGF7P2-201ENST00000332473 296 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
SHANK1Q9Y566 RNU6-288P-201ENST00000363690 104 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 RNU6-217P-201ENST00000384164 104 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 RNU6-769P-201ENST00000384407 104 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 SNORA26.8-201ENST00000391306 124 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 AL031577.2-201ENST00000404133 280 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 HMGN2P38-201ENST00000423806 265 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.68□□□□□ -2.14
SHANK1Q9Y566 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.68□□□□□ -2.14
SHANK1Q9Y566 BNIP3P2-201ENST00000441221 577 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.68□□□□□ -2.14
SHANK1Q9Y566 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.68□□□□□ -2.14
SHANK1Q9Y566 ART2BP-201ENST00000453501 499 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 AC090515.1-201ENST00000465295 476 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SHANK1Q9Y566 AC005178.1-201ENST00000508392 440 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 RNU7-51P-201ENST00000516560 62 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 RNA5SP82-201ENST00000516707 92 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 RNU6-201P-201ENST00000517100 61 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 RNA5SP490-201ENST00000517141 136 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 AP003072.2-201ENST00000527756 676 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.68□□□□□ -2.14
SHANK1Q9Y566 AC007115.1-201ENST00000546853 234 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 ZNF519P3-201ENST00000557158 1032 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 AL391261.3-201ENST00000557194 520 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 HMGB1P14-201ENST00000557424 591 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 BCRP9-201ENST00000605312 388 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SHANK1Q9Y566 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.68□□□□□ -2.14
SHANK1Q9Y566 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
SHANK1Q9Y566 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.68□□□□□ -2.14
SHANK1Q9Y566 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.68□□□□□ -2.14
SHANK1Q9Y566 RNU6-701P-201ENST00000384059 107 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 AL627390.1-201ENST00000396055 340 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 USP9YP6-201ENST00000413550 854 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 UBE2FP1-201ENST00000416536 447 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 RPL22P17-201ENST00000438729 315 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.68□□□□□ -2.14
SHANK1Q9Y566 RPL17P49-201ENST00000443728 411 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 RNU7-95P-201ENST00000459222 64 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.68□□□□□ -2.14
SHANK1Q9Y566 BET1P1-201ENST00000482276 359 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 ARL4AP2-201ENST00000507378 601 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.68□□□□□ -2.14
SHANK1Q9Y566 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SHANK1Q9Y566 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.68□□□□□ -2.14
SHANK1Q9Y566 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.68□□□□□ -2.14
SHANK1Q9Y566 GLUD1P4-201ENST00000590914 418 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 AL133393.1-201ENST00000603277 287 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 AC245014.2-201ENST00000603689 287 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 AC246785.4-201ENST00000605374 287 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 MIR6779-201ENST00000617283 64 ntBASIC1.68□□□□□ -2.14
SHANK1Q9Y566 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
SHANK1Q9Y566 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
SHANK1Q9Y566 AL390237.1-201ENST00000404226 1415 ntBASIC1.67□□□□□ -2.14
SHANK1Q9Y566 SNORA14A-201ENST00000364773 135 ntBASIC1.67□□□□□ -2.14
SHANK1Q9Y566 SNORD116-1-201ENST00000384335 95 ntBASIC1.67□□□□□ -2.14
SHANK1Q9Y566 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
SHANK1Q9Y566 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.67□□□□□ -2.14
SHANK1Q9Y566 NDUFB4P7-201ENST00000423198 363 ntBASIC1.67□□□□□ -2.14
SHANK1Q9Y566 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.67□□□□□ -2.14
SHANK1Q9Y566 HMGB1P27-201ENST00000431429 603 ntBASIC1.67□□□□□ -2.14
SHANK1Q9Y566 GPM6BP2-201ENST00000432046 144 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms