Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 RN7SKP24-201ENST00000515888 284 ntBASIC1.6□□□□□ -2.15
CHTOPQ9Y3Y2 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.6□□□□□ -2.15
CHTOPQ9Y3Y2 AC079600.2-201ENST00000550076 130 ntBASIC1.6□□□□□ -2.15
CHTOPQ9Y3Y2 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.6□□□□□ -2.15
CHTOPQ9Y3Y2 AC092325.1-201ENST00000566449 554 ntBASIC1.6□□□□□ -2.15
CHTOPQ9Y3Y2 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.6□□□□□ -2.15
CHTOPQ9Y3Y2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.6□□□□□ -2.15
CHTOPQ9Y3Y2 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.6□□□□□ -2.15
CHTOPQ9Y3Y2 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.6□□□□□ -2.15
CHTOPQ9Y3Y2 AL132822.1-201ENST00000617063 513 ntBASIC1.6□□□□□ -2.15
CHTOPQ9Y3Y2 MIR1291-201ENST00000627649 87 ntBASIC1.6□□□□□ -2.15
CHTOPQ9Y3Y2 ZNF680P1-201ENST00000436625 1469 ntBASIC1.6□□□□□ -2.15
CHTOPQ9Y3Y2 RNU6-661P-201ENST00000362409 107 ntBASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 RNU6-212P-201ENST00000362642 104 ntBASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 Y_RNA.99-201ENST00000363138 105 ntBASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 SNORA4.3-201ENST00000365564 137 ntBASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 MIR491-201ENST00000384877 84 ntBASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 USP9YP18-201ENST00000425912 695 ntBASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 RPS15AP28-201ENST00000435088 386 ntBASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 AC025033.1-201ENST00000463883 194 ntBASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 AL121594.1-201ENST00000475906 575 ntBASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 AC021146.8-201ENST00000507455 733 ntBASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 AC010587.2-201ENST00000511727 448 ntBASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 MTND2P7-201ENST00000521337 640 ntBASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 AC022080.3-201ENST00000544433 482 ntBASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 AC136618.2-201ENST00000575091 400 ntBASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 VN1R82P-201ENST00000601481 356 ntBASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 WISP1-OT1-201ENST00000602893 642 ntBASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 RMST_6.1-201ENST00000611980 203 ntBASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 AC010378.1-201ENST00000619270 362 ntBASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 AC009269.6-201ENST00000621778 588 ntBASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 MIR6766-201ENST00000622641 72 ntBASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 WWP1P1-201ENST00000466609 2769 ntBASIC1.59□□□□□ -2.15
CHTOPQ9Y3Y2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
CHTOPQ9Y3Y2 AL161722.3-201ENST00000605789 2983 ntBASIC1.59□□□□□ -2.16
CHTOPQ9Y3Y2 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 GNG5P1-201ENST00000255500 204 ntBASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 RNU6-859P-201ENST00000362728 107 ntBASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 Y_RNA.67-201ENST00000362870 100 ntBASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 Y_RNA.192-201ENST00000363977 102 ntBASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 RNU1-140P-201ENST00000365040 165 ntBASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 CBX3P9-201ENST00000402326 552 ntBASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 SNORA11.1-201ENST00000408133 129 ntBASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 NCOR1P3-201ENST00000420479 303 ntBASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 AL365400.1-201ENST00000431854 640 ntBASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 AL354941.1-201ENST00000438600 464 ntBASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 AL117351.1-201ENST00000438864 766 ntBASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 AL606517.1-201ENST00000446914 387 ntBASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 AL021397.1-201ENST00000451806 248 ntBASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 AC006026.2-201ENST00000457376 180 ntBASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 AC011825.1-201ENST00000484967 388 ntBASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 AC021146.2-201ENST00000504736 556 ntBASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 RNU6-467P-201ENST00000517027 110 ntBASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 AC074050.1-201ENST00000563247 211 ntBASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 AL606834.3-201ENST00000602615 496 ntBASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 AC174048.1-201ENST00000603389 144 ntBASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 AC097468.3-201ENST00000607956 456 ntBASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CHTOPQ9Y3Y2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 AC016717.2-201ENST00000609089 5141 ntBASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 RNU6-743P-201ENST00000364151 106 ntBASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 RNU6-1164P-201ENST00000364428 107 ntBASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 RNU6-1257P-201ENST00000384625 110 ntBASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 MIR34A-201ENST00000385130 110 ntBASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 BTF3P7-201ENST00000407097 488 ntBASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 AC006366.1-201ENST00000422002 759 ntBASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 AL365338.1-201ENST00000422282 858 ntBASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 MTCO3P5-201ENST00000433620 714 ntBASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 AL583843.1-201ENST00000456070 346 ntBASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 RNU6-965P-201ENST00000516721 96 ntBASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 AC018630.3-201ENST00000542637 96 ntBASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 MIR4422-201ENST00000581938 83 ntBASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 AP001485.1-201ENST00000604799 199 ntBASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 AC123912.5-201ENST00000605470 343 ntBASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 AC112220.3-201ENST00000605502 502 ntBASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 AC091965.4-201ENST00000607691 587 ntBASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 AL355472.4-201ENST00000610233 626 ntBASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 AC130324.3-201ENST00000614165 542 ntBASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms