Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
SSX2IPQ9Y2D8 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 Y_RNA.67-201ENST00000362870 100 ntBASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 RNA5SP42-201ENST00000364278 115 ntBASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 SAR1AP4-201ENST00000429225 591 ntBASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 HMGB3P11-201ENST00000440127 604 ntBASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 HMGN2P16-201ENST00000456802 261 ntBASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 DYNLL1P5-201ENST00000467158 270 ntBASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 AC012181.1-201ENST00000479895 423 ntBASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 RPS4XP22-201ENST00000480755 780 ntBASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 RPS15AP34-201ENST00000487776 387 ntBASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 RNU2-69P-201ENST00000516061 100 ntBASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 RNU6-914P-201ENST00000516749 109 ntBASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 RN7SKP289-201ENST00000517244 295 ntBASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 MIR5004-201ENST00000579078 107 ntBASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 MIR4474-201ENST00000579189 78 ntBASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 AC107294.1-201ENST00000609524 467 ntBASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 AL136164.4-201ENST00000625013 2135 ntBASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 AL133216.2-202ENST00000634512 349 ntBASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 AC099654.10-201ENST00000640395 161 ntBASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 HSPA8P4-201ENST00000511877 1920 ntBASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SSX2IPQ9Y2D8 Y_RNA.58-201ENST00000362807 102 ntBASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 Y_RNA.154-201ENST00000363624 102 ntBASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 RNY3P1-201ENST00000365085 102 ntBASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 RNY3-201ENST00000365484 102 ntBASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 Y_RNA.387-201ENST00000383918 102 ntBASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 Y_RNA.490-201ENST00000384413 102 ntBASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 RNA5SP31-201ENST00000411144 127 ntBASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 NDUFB4P7-201ENST00000423198 363 ntBASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 AL669831.1-202ENST00000428504 417 ntBASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 AC236972.2-201ENST00000434979 310 ntBASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 GTF2IP13-201ENST00000438487 386 ntBASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 AC115115.1-201ENST00000449927 248 ntBASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 RPL21P13-201ENST00000488305 481 ntBASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 Y_RNA.701-201ENST00000516812 110 ntBASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 RNU6-143P-201ENST00000516942 93 ntBASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 ATP5F1P5-201ENST00000526403 760 ntBASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 SYF2P1-201ENST00000550658 413 ntBASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 AC090115.3-201ENST00000553218 849 ntBASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 MIR4325-201ENST00000583049 90 ntBASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 MIR3942-201ENST00000585264 109 ntBASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 AC073657.2-201ENST00000605661 303 ntBASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 AC007742.2-201ENST00000618226 398 ntBASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SSX2IPQ9Y2D8 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 UBE2L2-201ENST00000254302 429 ntBASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 RNU6-254P-201ENST00000363377 107 ntBASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 Y_RNA.212-201ENST00000364177 102 ntBASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 Y_RNA.534-201ENST00000384599 112 ntBASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 SNORA48.5-201ENST00000391143 135 ntBASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 RPLP0P7-201ENST00000416050 667 ntBASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 AL158071.1-201ENST00000430315 461 ntBASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 AC006483.1-201ENST00000487308 313 ntBASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 AC079140.5-201ENST00000507882 310 ntBASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 RNU6-256P-201ENST00000516747 97 ntBASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 MIR5692A1-201ENST00000580523 69 ntBASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 DUSP12P1-201ENST00000612874 516 ntBASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 AL160413.1-201ENST00000622780 310 ntBASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 AC022418.1-201ENST00000624118 445 ntBASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 MTND4P23-201ENST00000447723 1363 ntBASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SSX2IPQ9Y2D8 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 AP002088.1-201ENST00000382740 395 ntBASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 RNU6-45P-201ENST00000384471 107 ntBASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 MIR128-1-201ENST00000384921 82 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms