Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 RNU6-333P-201ENST00000459117 107 ntBASIC3.74□□□□□ -1.81
HDAC9Q9UKV0 RPL23AP14-201ENST00000468281 468 ntBASIC3.74□□□□□ -1.81
HDAC9Q9UKV0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.74□□□□□ -1.81
HDAC9Q9UKV0 RPS4XP22-201ENST00000480755 780 ntBASIC3.74□□□□□ -1.81
HDAC9Q9UKV0 AC018710.1-201ENST00000506509 158 ntBASIC3.74□□□□□ -1.81
HDAC9Q9UKV0 TTC39CP1-201ENST00000512513 755 ntBASIC3.74□□□□□ -1.81
HDAC9Q9UKV0 RNA5SP367-201ENST00000516557 118 ntBASIC3.74□□□□□ -1.81
HDAC9Q9UKV0 RNA5SP471-201ENST00000516971 106 ntBASIC3.74□□□□□ -1.81
HDAC9Q9UKV0 AC011602.1-201ENST00000546484 331 ntBASIC3.74□□□□□ -1.81
HDAC9Q9UKV0 ADI1P3-201ENST00000549509 470 ntBASIC3.74□□□□□ -1.81
HDAC9Q9UKV0 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.74□□□□□ -1.81
HDAC9Q9UKV0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.74□□□□□ -1.81
HDAC9Q9UKV0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HDAC9Q9UKV0 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.74□□□□□ -1.81
HDAC9Q9UKV0 AC002545.1-201ENST00000592511 181 ntBASIC3.74□□□□□ -1.81
HDAC9Q9UKV0 AC022893.3-201ENST00000607665 437 ntBASIC3.74□□□□□ -1.81
HDAC9Q9UKV0 AL359547.2-201ENST00000615810 418 ntBASIC3.74□□□□□ -1.81
HDAC9Q9UKV0 MIR7843-201ENST00000622274 79 ntBASIC3.74□□□□□ -1.81
HDAC9Q9UKV0 AL008636.1-201ENST00000625038 1018 ntBASIC3.74□□□□□ -1.81
HDAC9Q9UKV0 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.74□□□□□ -1.81
HDAC9Q9UKV0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
HDAC9Q9UKV0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.74□□□□□ -1.81
HDAC9Q9UKV0 AC010680.1-201ENST00000590024 3590 ntBASIC3.74□□□□□ -1.81
HDAC9Q9UKV0 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HDAC9Q9UKV0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HDAC9Q9UKV0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.73□□□□□ -1.81
HDAC9Q9UKV0 AC022336.2-201ENST00000568966 2538 ntBASIC3.73□□□□□ -1.81
HDAC9Q9UKV0 SNORA72.1-201ENST00000363485 129 ntBASIC3.73□□□□□ -1.81
HDAC9Q9UKV0 RNU6-867P-201ENST00000364956 107 ntBASIC3.73□□□□□ -1.81
HDAC9Q9UKV0 RNU6-373P-201ENST00000411247 98 ntBASIC3.73□□□□□ -1.81
HDAC9Q9UKV0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.73□□□□□ -1.81
HDAC9Q9UKV0 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.73□□□□□ -1.81
HDAC9Q9UKV0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.73□□□□□ -1.81
HDAC9Q9UKV0 SNRPFP3-201ENST00000457792 225 ntBASIC3.73□□□□□ -1.81
HDAC9Q9UKV0 RPL7P5-201ENST00000471472 736 ntBASIC3.73□□□□□ -1.81
HDAC9Q9UKV0 RPL23AP11-201ENST00000475260 469 ntBASIC3.73□□□□□ -1.81
HDAC9Q9UKV0 MTCO2P30-201ENST00000503662 364 ntBASIC3.73□□□□□ -1.81
HDAC9Q9UKV0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.73□□□□□ -1.81
HDAC9Q9UKV0 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.73□□□□□ -1.81
HDAC9Q9UKV0 RNU6-1282P-201ENST00000516735 96 ntBASIC3.73□□□□□ -1.81
HDAC9Q9UKV0 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.73□□□□□ -1.81
HDAC9Q9UKV0 AC091544.4-201ENST00000555268 342 ntBASIC3.73□□□□□ -1.81
HDAC9Q9UKV0 AMZ2P1-203ENST00000565833 850 ntBASIC3.73□□□□□ -1.81
HDAC9Q9UKV0 MIR5583-1-201ENST00000580941 59 ntBASIC3.73□□□□□ -1.81
HDAC9Q9UKV0 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
HDAC9Q9UKV0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.73□□□□□ -1.81
HDAC9Q9UKV0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HDAC9Q9UKV0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 Y_RNA.157-201ENST00000363638 102 ntBASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 Y_RNA.231-201ENST00000364358 102 ntBASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 Y_RNA.534-201ENST00000384599 112 ntBASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 SNORD37.1-201ENST00000390968 65 ntBASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 CISD1P1-201ENST00000393907 327 ntBASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 AL606923.1-201ENST00000406616 190 ntBASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 RPL31P12-201ENST00000422587 358 ntBASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 HMGB1P27-201ENST00000431429 603 ntBASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 RPS24P13-201ENST00000442520 397 ntBASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 AC010095.1-201ENST00000443543 144 ntBASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 MTND3P10-201ENST00000450967 341 ntBASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 HMGN2P26-201ENST00000463169 339 ntBASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 AC010401.1-201ENST00000463867 348 ntBASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 AC021205.2-201ENST00000480069 347 ntBASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 CCDC34P1-201ENST00000507441 517 ntBASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 AL137161.1-201ENST00000532231 390 ntBASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 AP000867.2-201ENST00000532468 320 ntBASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 MIR4319-201ENST00000577285 85 ntBASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 AL158032.1-201ENST00000605401 106 ntBASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 AC009033.1-201ENST00000624279 431 ntBASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HDAC9Q9UKV0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HDAC9Q9UKV0 UBE2L2-201ENST00000254302 429 ntBASIC3.71□□□□□ -1.82
HDAC9Q9UKV0 RNU1-75P-201ENST00000347264 129 ntBASIC3.71□□□□□ -1.82
HDAC9Q9UKV0 Y_RNA.86-201ENST00000363020 111 ntBASIC3.71□□□□□ -1.82
HDAC9Q9UKV0 RNU6-1167P-201ENST00000363227 94 ntBASIC3.71□□□□□ -1.82
HDAC9Q9UKV0 Y_RNA.160-201ENST00000363677 92 ntBASIC3.71□□□□□ -1.82
HDAC9Q9UKV0 RNA5SP139-201ENST00000364340 117 ntBASIC3.71□□□□□ -1.82
HDAC9Q9UKV0 Y_RNA.279-201ENST00000364763 95 ntBASIC3.71□□□□□ -1.82
HDAC9Q9UKV0 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HDAC9Q9UKV0 RNU6-1027P-201ENST00000383998 107 ntBASIC3.71□□□□□ -1.82
HDAC9Q9UKV0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
HDAC9Q9UKV0 RNU2-33P-201ENST00000410344 192 ntBASIC3.71□□□□□ -1.82
HDAC9Q9UKV0 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HDAC9Q9UKV0 RPL21P111-201ENST00000418453 477 ntBASIC3.71□□□□□ -1.82
HDAC9Q9UKV0 BX679664.1-201ENST00000434429 253 ntBASIC3.71□□□□□ -1.82
HDAC9Q9UKV0 AC104058.1-201ENST00000448028 297 ntBASIC3.71□□□□□ -1.82
HDAC9Q9UKV0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms