Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 RN7SKP219-201ENST00000516825 296 ntBASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 AP005435.4-201ENST00000529514 284 ntBASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 AC016957.1-201ENST00000534895 309 ntBASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 ELOCP31-201ENST00000540463 467 ntBASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 AC021739.1-201ENST00000559631 174 ntBASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 MIR3944-201ENST00000581277 108 ntBASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 AC005498.1-201ENST00000592125 465 ntBASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 UCA1.1-201ENST00000620952 75 ntBASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 MIR3199-2-201ENST00000636243 86 ntBASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 AC000403.1-201ENST00000613696 3585 ntBASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 AL139276.1-201ENST00000311910 1001 ntBASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 MIR412-201ENST00000362142 91 ntBASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 SNORA38.1-201ENST00000364172 131 ntBASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 RNU6-371P-201ENST00000364283 108 ntBASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 RNU6-750P-201ENST00000390946 107 ntBASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 MIR1289-1-201ENST00000408836 144 ntBASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 RNU2-29P-201ENST00000410423 189 ntBASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 C8orf59P1-201ENST00000429930 303 ntBASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 FDX1P2-201ENST00000450769 375 ntBASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 SRRM1P2-201ENST00000464531 1192 ntBASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 SNORA40.12-201ENST00000516329 111 ntBASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 RNU6-506P-201ENST00000516553 94 ntBASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 AP002404.1-201ENST00000532005 451 ntBASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 AC006199.1-201ENST00000548728 219 ntBASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 AP003465.2-201ENST00000602571 373 ntBASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 AC107304.1-201ENST00000604229 296 ntBASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LIMA1Q9UHB6 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 RNU6-1085P-201ENST00000363576 107 ntBASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 RNU6-996P-201ENST00000365438 107 ntBASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 RNU6-1179P-201ENST00000384667 107 ntBASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 SNORA11-201ENST00000408789 128 ntBASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 RNU6-193P-201ENST00000410977 107 ntBASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 Y_RNA.623-201ENST00000411128 95 ntBASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 RPL21P90-201ENST00000415692 466 ntBASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 MTCYBP8-201ENST00000422855 651 ntBASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 SAR1AP4-201ENST00000429225 591 ntBASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 AL606489.2-201ENST00000433886 234 ntBASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 RPL23AP58-201ENST00000440453 469 ntBASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 RPL39P40-201ENST00000445481 146 ntBASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 RPS15AP27-201ENST00000449183 343 ntBASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 AC073415.1-201ENST00000449240 153 ntBASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 AC008716.1-201ENST00000511084 513 ntBASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 AC104383.1-201ENST00000530297 370 ntBASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 MIR5692A1-201ENST00000580523 69 ntBASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 AC024153.1-201ENST00000603103 365 ntBASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 AP001596.2-201ENST00000608410 312 ntBASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 U6.42-201ENST00000618440 107 ntBASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LIMA1Q9UHB6 AC092435.3-201ENST00000565538 3654 ntBASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 AC006020.1-201ENST00000420179 1854 ntBASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 RNU6-552P-201ENST00000362869 119 ntBASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 RNU6-1322P-201ENST00000364309 107 ntBASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 RNU6-715P-201ENST00000365204 103 ntBASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 U8.9-201ENST00000365667 134 ntBASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 RNU6-903P-201ENST00000391270 109 ntBASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 RNU6-648P-201ENST00000410190 107 ntBASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 AC096649.2-201ENST00000416186 393 ntBASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 RPL7P37-201ENST00000425095 738 ntBASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 TIMM9P3-201ENST00000428659 274 ntBASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 AC112220.1-201ENST00000434628 355 ntBASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 RPL7P54-201ENST00000438336 674 ntBASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 CACYBPP2-201ENST00000453625 678 ntBASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 RPS29P26-201ENST00000477483 171 ntBASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 AL163973.1-201ENST00000484753 577 ntBASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms