Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 AL590639.1-201ENST00000456484 337 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 AC104472.2-201ENST00000469035 601 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 TTC39CP1-201ENST00000512513 755 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 RNA5SP471-201ENST00000516971 106 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 AC107953.1-201ENST00000522216 297 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 AL137161.1-201ENST00000532231 390 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 BNIP3P6-201ENST00000549284 499 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 MIR3921-201ENST00000577308 85 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 AC002545.1-201ENST00000592511 181 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 AC174048.1-201ENST00000603389 144 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 AP002826.1-201ENST00000608835 315 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 AC096577.2-201ENST00000611455 153 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 DUSP12P1-201ENST00000612874 516 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.05□□□□□ -1.92
SMARCAL1Q9NZC9 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 HSPA8P4-201ENST00000511877 1920 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 UBE2L2-201ENST00000254302 429 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 RNU6-845P-201ENST00000362578 103 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 RNU6-522P-201ENST00000364497 107 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 RNU6-1009P-201ENST00000390996 107 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 EEF1A1P40-201ENST00000412883 573 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 CALM2P2-201ENST00000428512 440 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 SCARNA18-201ENST00000459004 134 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 RNU6-953P-201ENST00000459154 107 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 AC103975.1-201ENST00000482506 483 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 AC112206.3-201ENST00000514578 389 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 Y_RNA.665-201ENST00000516177 98 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 RNU6-927P-201ENST00000516199 100 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 SCARNA15.2-201ENST00000516409 127 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 RNU6-1314P-201ENST00000517139 104 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 AC022690.1-201ENST00000526681 550 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 AC243972.3-201ENST00000539655 198 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 AC091135.1-201ENST00000585943 307 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 AL138889.2-201ENST00000603883 242 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 YPEL5P2-201ENST00000605553 359 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 MIR15A-201ENST00000607334 83 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 AC005046.1-201ENST00000608515 625 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 AC034102.8-201ENST00000615146 484 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 AL359547.2-201ENST00000615810 418 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 AC090132.2-201ENST00000615881 347 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 AC009248.2-201ENST00000619826 254 ntBASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SMARCAL1Q9NZC9 SDAD1P2-201ENST00000441308 2028 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 RNU6-797P-201ENST00000363101 109 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 RNU6-512P-201ENST00000364438 103 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 RNU6-1127P-201ENST00000384580 107 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 RNU6-817P-201ENST00000391083 104 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 SNORA11.1-201ENST00000408133 129 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 RNU4-26P-201ENST00000410270 107 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 PDCL2P1-201ENST00000419302 352 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 RPL35AP12-201ENST00000425362 338 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 RPL7P12-201ENST00000446719 750 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 AC104058.1-201ENST00000448028 297 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 RPS15AP27-201ENST00000449183 343 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 snoU13.22-201ENST00000459428 104 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 RPL23AP11-201ENST00000475260 469 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 RPS26P21-201ENST00000475397 348 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 AC083904.1-201ENST00000487828 231 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 AC006445.1-201ENST00000491925 405 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 RN7SKP272-201ENST00000516988 232 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 RPL7P20-201ENST00000520308 745 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 RAB11AP2-201ENST00000545905 639 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 AC023043.3-201ENST00000593113 385 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 AC092807.2-201ENST00000609367 243 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 AL359314.1-201ENST00000616913 261 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 AC002076.2-201ENST00000617362 122 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 AC091953.5-201ENST00000622919 233 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 AL035425.3-201ENST00000564206 4996 ntBASIC3.03□□□□□ -1.92
SMARCAL1Q9NZC9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.93
SMARCAL1Q9NZC9 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms