Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 HIGD1AP2-201ENST00000446367 280 ntBASIC3.67□□□□□ -1.82
MKS1Q9NXB0 AL031274.1-201ENST00000450334 232 ntBASIC3.67□□□□□ -1.82
MKS1Q9NXB0 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.67□□□□□ -1.82
MKS1Q9NXB0 Y_RNA.632-201ENST00000459189 102 ntBASIC3.67□□□□□ -1.82
MKS1Q9NXB0 RNU7-23P-201ENST00000459465 62 ntBASIC3.67□□□□□ -1.82
MKS1Q9NXB0 AC091179.1-201ENST00000461606 579 ntBASIC3.67□□□□□ -1.82
MKS1Q9NXB0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.67□□□□□ -1.82
MKS1Q9NXB0 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.67□□□□□ -1.82
MKS1Q9NXB0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.67□□□□□ -1.82
MKS1Q9NXB0 MTND4LP22-201ENST00000508209 276 ntBASIC3.67□□□□□ -1.82
MKS1Q9NXB0 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.67□□□□□ -1.82
MKS1Q9NXB0 HPRT1P3-201ENST00000539521 576 ntBASIC3.67□□□□□ -1.82
MKS1Q9NXB0 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.67□□□□□ -1.82
MKS1Q9NXB0 AC021739.1-201ENST00000559631 174 ntBASIC3.67□□□□□ -1.82
MKS1Q9NXB0 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.67□□□□□ -1.82
MKS1Q9NXB0 AL359757.2-201ENST00000624309 274 ntBASIC3.67□□□□□ -1.82
MKS1Q9NXB0 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.67□□□□□ -1.82
MKS1Q9NXB0 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.67□□□□□ -1.82
MKS1Q9NXB0 CDC27P3-201ENST00000635418 1910 ntBASIC3.67□□□□□ -1.82
MKS1Q9NXB0 AC073073.2-201ENST00000609827 2578 ntBASIC3.67□□□□□ -1.82
MKS1Q9NXB0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
MKS1Q9NXB0 AC006026.1-201ENST00000444025 1803 ntBASIC3.67□□□□□ -1.82
MKS1Q9NXB0 AC233263.6-201ENST00000631132 1963 ntBASIC3.67□□□□□ -1.82
MKS1Q9NXB0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.67□□□□□ -1.82
MKS1Q9NXB0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
MKS1Q9NXB0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
MKS1Q9NXB0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
MKS1Q9NXB0 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
MKS1Q9NXB0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
MKS1Q9NXB0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
MKS1Q9NXB0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
MKS1Q9NXB0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
MKS1Q9NXB0 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
MKS1Q9NXB0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.66□□□□□ -1.82
MKS1Q9NXB0 RNU5E-7P-201ENST00000365290 117 ntBASIC3.66□□□□□ -1.82
MKS1Q9NXB0 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
MKS1Q9NXB0 RPL21P40-201ENST00000428586 483 ntBASIC3.66□□□□□ -1.82
MKS1Q9NXB0 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
MKS1Q9NXB0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.66□□□□□ -1.82
MKS1Q9NXB0 AP002884.2-201ENST00000471647 395 ntBASIC3.66□□□□□ -1.82
MKS1Q9NXB0 HMGN2P13-201ENST00000476476 274 ntBASIC3.66□□□□□ -1.82
MKS1Q9NXB0 RNU6-559P-201ENST00000516151 98 ntBASIC3.66□□□□□ -1.82
MKS1Q9NXB0 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.66□□□□□ -1.82
MKS1Q9NXB0 TGIF1P1-201ENST00000558095 802 ntBASIC3.66□□□□□ -1.82
MKS1Q9NXB0 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.66□□□□□ -1.82
MKS1Q9NXB0 FRG2DP-202ENST00000566967 323 ntBASIC3.66□□□□□ -1.82
MKS1Q9NXB0 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.66□□□□□ -1.82
MKS1Q9NXB0 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.66□□□□□ -1.82
MKS1Q9NXB0 AL121917.1-203ENST00000605534 577 ntBASIC3.66□□□□□ -1.82
MKS1Q9NXB0 MIR6128-201ENST00000615528 109 ntBASIC3.66□□□□□ -1.82
MKS1Q9NXB0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.66□□□□□ -1.82
MKS1Q9NXB0 AC010378.1-201ENST00000619270 362 ntBASIC3.66□□□□□ -1.82
MKS1Q9NXB0 AC138627.2-201ENST00000624202 601 ntBASIC3.66□□□□□ -1.82
MKS1Q9NXB0 AP000553.6-201ENST00000641242 118 ntBASIC3.66□□□□□ -1.82
MKS1Q9NXB0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
MKS1Q9NXB0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
MKS1Q9NXB0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
MKS1Q9NXB0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.65□□□□□ -1.82
MKS1Q9NXB0 SNORD62.1-201ENST00000362541 86 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 Y_RNA.813-201ENST00000364639 102 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 RNU6-827P-201ENST00000365553 106 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 Y_RNA.482-201ENST00000384377 111 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 RNU6-1297P-201ENST00000384415 104 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
MKS1Q9NXB0 RNU6-55P-201ENST00000411092 107 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 RNU6-954P-201ENST00000411355 107 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 RAB9AP3-201ENST00000412737 573 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 AL117339.3-201ENST00000418733 162 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 ATG3P1-201ENST00000419507 911 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.65□□□□□ -1.83
MKS1Q9NXB0 RAB9AP1-201ENST00000449393 573 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.65□□□□□ -1.83
MKS1Q9NXB0 AC009220.1-201ENST00000451614 275 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 AC013470.1-201ENST00000453438 462 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 AL031183.1-201ENST00000457667 207 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 RNU7-187P-201ENST00000458985 68 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.65□□□□□ -1.83
MKS1Q9NXB0 AP004607.1-201ENST00000524456 203 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.65□□□□□ -1.83
MKS1Q9NXB0 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.65□□□□□ -1.83
MKS1Q9NXB0 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 AC023575.1-201ENST00000580510 358 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 AL160281.1-201ENST00000605307 311 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 AC135507.2-201ENST00000612443 309 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 AC022149.2-201ENST00000621061 203 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 U4.7-201ENST00000638126 106 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 MIR492-201ENST00000638676 116 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
MKS1Q9NXB0 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
MKS1Q9NXB0 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.65□□□□□ -1.83
MKS1Q9NXB0 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.65□□□□□ -1.83
MKS1Q9NXB0 ADAM3A-203ENST00000461344 2157 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 RLIMP1-201ENST00000339626 1680 ntBASIC3.65□□□□□ -1.83
MKS1Q9NXB0 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
MKS1Q9NXB0 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
MKS1Q9NXB0 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.64□□□□□ -1.83
MKS1Q9NXB0 RNU6-78P-201ENST00000362897 107 ntBASIC3.64□□□□□ -1.83
MKS1Q9NXB0 RNU6-942P-201ENST00000363002 107 ntBASIC3.64□□□□□ -1.83
MKS1Q9NXB0 RNU6-593P-201ENST00000364716 112 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms