Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
SSU72Q9NP77 MIR411-201ENST00000362239 96 ntBASIC4.26□□□□□ -1.73
SSU72Q9NP77 RNU6-335P-201ENST00000364563 113 ntBASIC4.26□□□□□ -1.73
SSU72Q9NP77 RNU5E-7P-201ENST00000365290 117 ntBASIC4.26□□□□□ -1.73
SSU72Q9NP77 RNU6-318P-201ENST00000384283 103 ntBASIC4.26□□□□□ -1.73
SSU72Q9NP77 RNU6-72P-201ENST00000384285 79 ntBASIC4.26□□□□□ -1.73
SSU72Q9NP77 MIR34A-201ENST00000385130 110 ntBASIC4.26□□□□□ -1.73
SSU72Q9NP77 RNA5SP213-201ENST00000391031 106 ntBASIC4.26□□□□□ -1.73
SSU72Q9NP77 Y_RNA.793-201ENST00000411222 111 ntBASIC4.26□□□□□ -1.73
SSU72Q9NP77 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.26□□□□□ -1.73
SSU72Q9NP77 TMSB10P2-201ENST00000416049 131 ntBASIC4.26□□□□□ -1.73
SSU72Q9NP77 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.26□□□□□ -1.73
SSU72Q9NP77 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.26□□□□□ -1.73
SSU72Q9NP77 TOMM20P4-201ENST00000427861 435 ntBASIC4.26□□□□□ -1.73
SSU72Q9NP77 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.26□□□□□ -1.73
SSU72Q9NP77 CYCSP32-201ENST00000440548 321 ntBASIC4.26□□□□□ -1.73
SSU72Q9NP77 AL391987.1-201ENST00000441025 200 ntBASIC4.26□□□□□ -1.73
SSU72Q9NP77 PIGFP3-201ENST00000441918 722 ntBASIC4.26□□□□□ -1.73
SSU72Q9NP77 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.26□□□□□ -1.73
SSU72Q9NP77 snoU13.30-201ENST00000458951 104 ntBASIC4.26□□□□□ -1.73
SSU72Q9NP77 RPS26P21-201ENST00000475397 348 ntBASIC4.26□□□□□ -1.73
SSU72Q9NP77 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.26□□□□□ -1.73
SSU72Q9NP77 AC090281.1-201ENST00000523019 276 ntBASIC4.26□□□□□ -1.73
SSU72Q9NP77 MIR4737-201ENST00000583979 81 ntBASIC4.26□□□□□ -1.73
SSU72Q9NP77 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.26□□□□□ -1.73
SSU72Q9NP77 SNRPGP15-201ENST00000600149 222 ntBASIC4.26□□□□□ -1.73
SSU72Q9NP77 AC136601.2-201ENST00000604356 474 ntBASIC4.26□□□□□ -1.73
SSU72Q9NP77 AC007390.2-201ENST00000606229 3803 ntBASIC4.26□□□□□ -1.73
SSU72Q9NP77 MIR4302-201ENST00000638058 60 ntBASIC4.26□□□□□ -1.73
SSU72Q9NP77 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.26□□□□□ -1.73
SSU72Q9NP77 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.26□□□□□ -1.73
SSU72Q9NP77 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
SSU72Q9NP77 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSU72Q9NP77 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSU72Q9NP77 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.25□□□□□ -1.73
SSU72Q9NP77 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSU72Q9NP77 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSU72Q9NP77 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SSU72Q9NP77 RNU6-682P-201ENST00000363843 106 ntBASIC4.25□□□□□ -1.73
SSU72Q9NP77 Y_RNA.199-201ENST00000364014 102 ntBASIC4.25□□□□□ -1.73
SSU72Q9NP77 RNA5SP175-201ENST00000364275 119 ntBASIC4.25□□□□□ -1.73
SSU72Q9NP77 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
SSU72Q9NP77 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SSU72Q9NP77 RN7SKP213-201ENST00000410746 298 ntBASIC4.25□□□□□ -1.73
SSU72Q9NP77 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.25□□□□□ -1.73
SSU72Q9NP77 AL356535.1-201ENST00000440335 398 ntBASIC4.25□□□□□ -1.73
SSU72Q9NP77 RPSAP50-201ENST00000481955 852 ntBASIC4.25□□□□□ -1.73
SSU72Q9NP77 RPL23AP75-201ENST00000491601 451 ntBASIC4.25□□□□□ -1.73
SSU72Q9NP77 SNORA70.16-201ENST00000516390 95 ntBASIC4.25□□□□□ -1.73
SSU72Q9NP77 IGKV2-38-201ENST00000517443 247 ntBASIC4.25□□□□□ -1.73
SSU72Q9NP77 IGKV1-32-201ENST00000519290 311 ntBASIC4.25□□□□□ -1.73
SSU72Q9NP77 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.25□□□□□ -1.73
SSU72Q9NP77 MIR4782-201ENST00000577987 79 ntBASIC4.25□□□□□ -1.73
SSU72Q9NP77 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.25□□□□□ -1.73
SSU72Q9NP77 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.25□□□□□ -1.73
SSU72Q9NP77 AL359693.1-201ENST00000614959 2407 ntBASIC4.25□□□□□ -1.73
SSU72Q9NP77 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
SSU72Q9NP77 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.25□□□□□ -1.73
SSU72Q9NP77 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
SSU72Q9NP77 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSU72Q9NP77 AP001486.2-201ENST00000561652 5113 ntBASIC4.24□□□□□ -1.73
SSU72Q9NP77 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSU72Q9NP77 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSU72Q9NP77 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.24□□□□□ -1.73
SSU72Q9NP77 RNU6-105P-201ENST00000363909 104 ntBASIC4.24□□□□□ -1.73
SSU72Q9NP77 Z98749.2-208ENST00000381646 500 ntBASIC4.24□□□□□ -1.73
SSU72Q9NP77 RNU6-17P-201ENST00000384245 107 ntBASIC4.24□□□□□ -1.73
SSU72Q9NP77 SNORD63-201ENST00000384262 68 ntBASIC4.24□□□□□ -1.73
SSU72Q9NP77 Y_RNA.506-201ENST00000384494 102 ntBASIC4.24□□□□□ -1.73
SSU72Q9NP77 RNU6-18P-201ENST00000384527 107 ntBASIC4.24□□□□□ -1.73
SSU72Q9NP77 SNORD78.2-201ENST00000391076 69 ntBASIC4.24□□□□□ -1.73
SSU72Q9NP77 RN7SKP206-201ENST00000410823 293 ntBASIC4.24□□□□□ -1.73
SSU72Q9NP77 AC098614.2-201ENST00000426040 255 ntBASIC4.24□□□□□ -1.73
SSU72Q9NP77 RPS6P12-201ENST00000432491 726 ntBASIC4.24□□□□□ -1.73
SSU72Q9NP77 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.24□□□□□ -1.73
SSU72Q9NP77 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.24□□□□□ -1.73
SSU72Q9NP77 RPL7P49-201ENST00000471402 708 ntBASIC4.24□□□□□ -1.73
SSU72Q9NP77 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSU72Q9NP77 RPL30P1-201ENST00000488676 339 ntBASIC4.24□□□□□ -1.73
SSU72Q9NP77 VWA8P1-201ENST00000510889 176 ntBASIC4.24□□□□□ -1.73
SSU72Q9NP77 AP006245.1-201ENST00000522549 120 ntBASIC4.24□□□□□ -1.73
SSU72Q9NP77 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.24□□□□□ -1.73
SSU72Q9NP77 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.24□□□□□ -1.73
SSU72Q9NP77 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.24□□□□□ -1.73
SSU72Q9NP77 HNRNPCP4-201ENST00000571636 900 ntBASIC4.24□□□□□ -1.73
SSU72Q9NP77 MIR6768-201ENST00000610734 72 ntBASIC4.24□□□□□ -1.73
SSU72Q9NP77 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SSU72Q9NP77 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SSU72Q9NP77 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSU72Q9NP77 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSU72Q9NP77 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SSU72Q9NP77 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSU72Q9NP77 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSU72Q9NP77 RNA5SP322-201ENST00000363617 119 ntBASIC4.23□□□□□ -1.73
SSU72Q9NP77 Y_RNA.286-201ENST00000364813 102 ntBASIC4.23□□□□□ -1.73
SSU72Q9NP77 RNU4-9P-201ENST00000364951 139 ntBASIC4.23□□□□□ -1.73
SSU72Q9NP77 RNU6-290P-201ENST00000365212 101 ntBASIC4.23□□□□□ -1.73
SSU72Q9NP77 RNU1-89P-201ENST00000384592 164 ntBASIC4.23□□□□□ -1.73
SSU72Q9NP77 RNU6-1140P-201ENST00000410517 106 ntBASIC4.23□□□□□ -1.73
SSU72Q9NP77 RNA5SP31-201ENST00000411144 127 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms