Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC174048.1-201ENST00000603389 144 ntBASIC2.09□□□□□ -2.07
LRRC40Q9H9A6 AL713866.2-201ENST00000603579 219 ntBASIC2.09□□□□□ -2.07
LRRC40Q9H9A6 AC121334.2-201ENST00000605387 271 ntBASIC2.09□□□□□ -2.07
LRRC40Q9H9A6 AC008121.3-201ENST00000618726 433 ntBASIC2.09□□□□□ -2.07
LRRC40Q9H9A6 MIR6852-201ENST00000621699 66 ntBASIC2.09□□□□□ -2.07
LRRC40Q9H9A6 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
LRRC40Q9H9A6 MTND4P1-201ENST00000457501 1466 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 MIR449A-201ENST00000362113 91 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 Y_RNA.18-201ENST00000362461 102 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 RNU6-1159P-201ENST00000362933 107 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 SNORD114-19-201ENST00000363072 75 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 RNY4P16-201ENST00000364768 94 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 SNORA25B-201ENST00000365507 128 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 RNU6-946P-201ENST00000383878 107 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 AC092809.3-201ENST00000415453 231 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 AL353777.1-201ENST00000425552 326 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 AC003071.1-201ENST00000451219 789 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 AC022493.1-201ENST00000492984 337 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 MTATP6P9-201ENST00000515039 680 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 MIR514B-201ENST00000516774 80 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 SNORA48.11-201ENST00000517015 89 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 AC233702.2-202ENST00000562547 291 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 AL031274.2-201ENST00000599419 203 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 AL031281.1-201ENST00000604049 488 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 AC018638.7-201ENST00000605836 1114 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 AC005014.3-201ENST00000605985 190 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 MIR15A-201ENST00000607334 83 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 AC103710.2-201ENST00000609912 942 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 AL355816.2-201ENST00000610049 647 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 AC022306.3-201ENST00000619930 550 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 SDR42E1P4-201ENST00000620894 481 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 AC091953.2-201ENST00000623979 160 ntBASIC2.08□□□□□ -2.08
LRRC40Q9H9A6 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 RNU6-190P-201ENST00000384154 102 ntBASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 HMGN2P39-201ENST00000398005 273 ntBASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 RNA5SP338-201ENST00000410495 85 ntBASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 MTCO2P8-201ENST00000412213 658 ntBASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 RPL22P17-201ENST00000438729 315 ntBASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 AC004854.1-201ENST00000440356 349 ntBASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 PMCHL2-203ENST00000457791 237 ntBASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 MTND3P3-201ENST00000505004 126 ntBASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 AC008413.1-201ENST00000511864 177 ntBASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 AC119751.5-201ENST00000514077 770 ntBASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 RNU5A-4P-201ENST00000516588 111 ntBASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 Y_RNA.689-201ENST00000516589 107 ntBASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 AC107934.1-201ENST00000522215 217 ntBASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 NDUFA8P1-201ENST00000605525 367 ntBASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 AC144521.1-201ENST00000607148 956 ntBASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 AL590808.1-201ENST00000618696 141 ntBASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 AL356266.1-201ENST00000623311 483 ntBASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 AC010149.2-201ENST00000637608 315 ntBASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 AP006437.1-201ENST00000641440 3685 ntBASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
LRRC40Q9H9A6 RNA5SP276-201ENST00000362580 94 ntBASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 RNU6-960P-201ENST00000364056 120 ntBASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 RNA5SP138-201ENST00000365098 114 ntBASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 RNU6-395P-201ENST00000365662 106 ntBASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 RNU6-1032P-201ENST00000384100 107 ntBASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 AL591034.2-201ENST00000402839 359 ntBASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 RNA5SP425-201ENST00000410336 112 ntBASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 AC016831.2-201ENST00000417179 352 ntBASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 AC138623.1-201ENST00000418060 216 ntBASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 AC106883.1-201ENST00000418805 562 ntBASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 MYL8P-204ENST00000431574 518 ntBASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 USP9YP8-201ENST00000441913 500 ntBASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 AC012308.1-201ENST00000451232 178 ntBASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 DUXAP8-207ENST00000456786 622 ntBASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 IGKV3-31-201ENST00000523109 329 ntBASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 FAM92A1P1-201ENST00000528023 890 ntBASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 OR5B19P-201ENST00000531766 928 ntBASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 AC025678.1-201ENST00000567861 338 ntBASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 AP001004.1-201ENST00000582468 324 ntBASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 RPL30P11-203ENST00000598995 310 ntBASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 AL031667.3-201ENST00000620124 655 ntBASIC2.06□□□□□ -2.08
LRRC40Q9H9A6 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms