Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
BHLHE41Q9C0J9 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
BHLHE41Q9C0J9 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
BHLHE41Q9C0J9 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
BHLHE41Q9C0J9 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
BHLHE41Q9C0J9 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
BHLHE41Q9C0J9 AP001273.1-201ENST00000624493 3152 ntBASIC4.37□□□□□ -1.71
BHLHE41Q9C0J9 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 AL136964.1-201ENST00000622038 2990 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 FTLP6-201ENST00000355274 422 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 RNA5SP361-201ENST00000362686 118 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 Y_RNA.569-201ENST00000384749 103 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 MIR493-201ENST00000385254 89 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 RNU6-1197P-201ENST00000391183 107 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 Y_RNA.626-201ENST00000411288 95 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 COX6CP10-201ENST00000416832 224 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 BX510359.2-201ENST00000417920 305 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 HMGN2P30-201ENST00000423237 256 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 AC092047.1-201ENST00000424997 240 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 AC016831.4-201ENST00000438302 307 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 AC243964.1-201ENST00000441814 261 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 HMGN2P21-201ENST00000447764 270 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 RPL37P4-201ENST00000448908 268 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 MTATP6P7-201ENST00000453315 681 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 BTF3L4P4-201ENST00000506381 449 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 Y_RNA.679-201ENST00000516416 91 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 AL110118.1-201ENST00000553543 400 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 AL590392.1-201ENST00000604960 446 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 AC005296.1-201ENST00000616145 209 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 AC087385.3-201ENST00000620477 187 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 ZNF826P-207ENST00000622273 1910 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 AL079305.1-201ENST00000623159 3008 ntBASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
BHLHE41Q9C0J9 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
BHLHE41Q9C0J9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.35□□□□□ -1.71
BHLHE41Q9C0J9 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.35□□□□□ -1.71
BHLHE41Q9C0J9 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
BHLHE41Q9C0J9 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.35□□□□□ -1.71
BHLHE41Q9C0J9 RNU6-1020P-201ENST00000363684 107 ntBASIC4.35□□□□□ -1.71
BHLHE41Q9C0J9 Z98749.2-208ENST00000381646 500 ntBASIC4.35□□□□□ -1.71
BHLHE41Q9C0J9 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.35□□□□□ -1.71
BHLHE41Q9C0J9 SNORD116-20-201ENST00000384529 92 ntBASIC4.35□□□□□ -1.71
BHLHE41Q9C0J9 RN7SKP100-201ENST00000411258 284 ntBASIC4.35□□□□□ -1.71
BHLHE41Q9C0J9 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.35□□□□□ -1.71
BHLHE41Q9C0J9 AC092017.2-201ENST00000427600 362 ntBASIC4.35□□□□□ -1.71
BHLHE41Q9C0J9 AL031659.1-201ENST00000447075 539 ntBASIC4.35□□□□□ -1.71
BHLHE41Q9C0J9 SNRPGP7-201ENST00000469016 106 ntBASIC4.35□□□□□ -1.71
BHLHE41Q9C0J9 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.35□□□□□ -1.71
BHLHE41Q9C0J9 AC091874.1-201ENST00000511402 339 ntBASIC4.35□□□□□ -1.71
BHLHE41Q9C0J9 AC093840.1-201ENST00000511599 336 ntBASIC4.35□□□□□ -1.71
BHLHE41Q9C0J9 RNU6-1212P-201ENST00000517023 104 ntBASIC4.35□□□□□ -1.71
BHLHE41Q9C0J9 ZNF192P1-203ENST00000565888 810 ntBASIC4.35□□□□□ -1.71
BHLHE41Q9C0J9 MIR5695-201ENST00000579717 85 ntBASIC4.35□□□□□ -1.71
BHLHE41Q9C0J9 MIR3667-201ENST00000581025 74 ntBASIC4.35□□□□□ -1.71
BHLHE41Q9C0J9 LINC00901.1-201ENST00000617252 152 ntBASIC4.35□□□□□ -1.71
BHLHE41Q9C0J9 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.35□□□□□ -1.71
BHLHE41Q9C0J9 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
BHLHE41Q9C0J9 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 OR51H2P-202ENST00000641424 3046 ntBASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 RNU1-108P-201ENST00000362556 161 ntBASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 RNA5SP191-201ENST00000362585 102 ntBASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 RNU6-740P-201ENST00000364734 105 ntBASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 Y_RNA.286-201ENST00000364813 102 ntBASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 RNU1-140P-201ENST00000365040 165 ntBASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 Y_RNA.319-201ENST00000365138 92 ntBASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 SNORA29-201ENST00000384183 140 ntBASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 RNU6-493P-201ENST00000391321 108 ntBASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 PPIAP31-201ENST00000405422 495 ntBASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 HDGFP1-201ENST00000405943 252 ntBASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 Y_RNA.590-201ENST00000410140 107 ntBASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 AC005154.2-201ENST00000438110 379 ntBASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 AC096638.1-201ENST00000444678 216 ntBASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms