Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AL590365.1-201ENST00000450788 243 ntBASIC0.22□□□□□ -2.37
COL12A1Q99715 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.22□□□□□ -2.37
COL12A1Q99715 SETP11-201ENST00000473027 690 ntBASIC0.22□□□□□ -2.37
COL12A1Q99715 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.22□□□□□ -2.37
COL12A1Q99715 AC115085.1-201ENST00000588924 229 ntBASIC0.22□□□□□ -2.37
COL12A1Q99715 AL355297.3-201ENST00000604082 446 ntBASIC0.22□□□□□ -2.37
COL12A1Q99715 AC084824.5-201ENST00000612009 413 ntBASIC0.22□□□□□ -2.37
COL12A1Q99715 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.21□□□□□ -2.38
COL12A1Q99715 Y_RNA.498-201ENST00000384460 102 ntBASIC0.21□□□□□ -2.38
COL12A1Q99715 RPS3AP37-201ENST00000419176 745 ntBASIC0.21□□□□□ -2.38
COL12A1Q99715 BTF3P11-201ENST00000426582 477 ntBASIC0.21□□□□□ -2.38
COL12A1Q99715 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
COL12A1Q99715 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.21□□□□□ -2.38
COL12A1Q99715 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.21□□□□□ -2.38
COL12A1Q99715 AC090142.3-201ENST00000519012 385 ntBASIC0.21□□□□□ -2.38
COL12A1Q99715 AC136628.3-201ENST00000521868 290 ntBASIC0.21□□□□□ -2.38
COL12A1Q99715 MIR5571-201ENST00000577998 113 ntBASIC0.21□□□□□ -2.38
COL12A1Q99715 AL590282.1-201ENST00000610379 1136 ntBASIC0.21□□□□□ -2.38
COL12A1Q99715 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.21□□□□□ -2.38
COL12A1Q99715 Y_RNA.536-201ENST00000384621 113 ntBASIC0.21□□□□□ -2.38
COL12A1Q99715 AL035410.1-201ENST00000427409 427 ntBASIC0.21□□□□□ -2.38
COL12A1Q99715 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.21□□□□□ -2.38
COL12A1Q99715 AL034418.1-201ENST00000448675 860 ntBASIC0.21□□□□□ -2.38
COL12A1Q99715 AP1S2P1-201ENST00000457344 379 ntBASIC0.21□□□□□ -2.38
COL12A1Q99715 RPL23AP54-201ENST00000495129 419 ntBASIC0.21□□□□□ -2.38
COL12A1Q99715 AC073410.2-201ENST00000603240 332 ntBASIC0.21□□□□□ -2.38
COL12A1Q99715 AC091925.2-201ENST00000625059 256 ntBASIC0.21□□□□□ -2.38
COL12A1Q99715 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.2□□□□□ -2.38
COL12A1Q99715 AC023141.4-201ENST00000412031 328 ntBASIC0.2□□□□□ -2.38
COL12A1Q99715 AC092634.2-201ENST00000428146 1010 ntBASIC0.2□□□□□ -2.38
COL12A1Q99715 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.2□□□□□ -2.38
COL12A1Q99715 AC138853.1-201ENST00000503549 823 ntBASIC0.2□□□□□ -2.38
COL12A1Q99715 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.2□□□□□ -2.38
COL12A1Q99715 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.2□□□□□ -2.38
COL12A1Q99715 AC090115.3-201ENST00000553218 849 ntBASIC0.2□□□□□ -2.38
COL12A1Q99715 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.2□□□□□ -2.38
COL12A1Q99715 AC004832.4-201ENST00000608952 331 ntBASIC0.2□□□□□ -2.38
COL12A1Q99715 AC004241.3-201ENST00000611728 517 ntBASIC0.2□□□□□ -2.38
COL12A1Q99715 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC0.2□□□□□ -2.38
COL12A1Q99715 MIR4496-201ENST00000635896 61 ntBASIC0.2□□□□□ -2.38
COL12A1Q99715 AC110792.3-201ENST00000595906 1614 ntBASIC0.2□□□□□ -2.38
COL12A1Q99715 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
COL12A1Q99715 U3.8-201ENST00000363675 217 ntBASIC0.2□□□□□ -2.38
COL12A1Q99715 RNU4-7P-201ENST00000364758 141 ntBASIC0.2□□□□□ -2.38
COL12A1Q99715 Y_RNA.403-201ENST00000383977 101 ntBASIC0.2□□□□□ -2.38
COL12A1Q99715 RNU6-152P-201ENST00000384037 107 ntBASIC0.2□□□□□ -2.38
COL12A1Q99715 SNORA8-201ENST00000384574 139 ntBASIC0.2□□□□□ -2.38
COL12A1Q99715 CCNG1P1-201ENST00000406783 885 ntBASIC0.2□□□□□ -2.38
COL12A1Q99715 AP001025.1-201ENST00000486139 332 ntBASIC0.2□□□□□ -2.38
COL12A1Q99715 AC112206.3-201ENST00000514578 389 ntBASIC0.2□□□□□ -2.38
COL12A1Q99715 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.2□□□□□ -2.38
COL12A1Q99715 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.2□□□□□ -2.38
COL12A1Q99715 SNORD3E-201ENST00000362899 217 ntBASIC0.19□□□□□ -2.38
COL12A1Q99715 Y_RNA.181-201ENST00000363872 101 ntBASIC0.19□□□□□ -2.38
COL12A1Q99715 RNU6-119P-201ENST00000364882 107 ntBASIC0.19□□□□□ -2.38
COL12A1Q99715 RPL22P18-201ENST00000417197 377 ntBASIC0.19□□□□□ -2.38
COL12A1Q99715 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.19□□□□□ -2.38
COL12A1Q99715 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.19□□□□□ -2.38
COL12A1Q99715 AP003717.3-201ENST00000544832 1180 ntBASIC0.19□□□□□ -2.38
COL12A1Q99715 NIFKP6-201ENST00000598115 845 ntBASIC0.19□□□□□ -2.38
COL12A1Q99715 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.19□□□□□ -2.38
COL12A1Q99715 Y_RNA.428-201ENST00000384078 102 ntBASIC0.19□□□□□ -2.38
COL12A1Q99715 MTND4LP11-201ENST00000422184 280 ntBASIC0.19□□□□□ -2.38
COL12A1Q99715 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.19□□□□□ -2.38
COL12A1Q99715 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.19□□□□□ -2.38
COL12A1Q99715 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.19□□□□□ -2.38
COL12A1Q99715 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.19□□□□□ -2.38
COL12A1Q99715 RNA5SP165-201ENST00000517142 115 ntBASIC0.19□□□□□ -2.38
COL12A1Q99715 AC021749.1-201ENST00000604322 607 ntBASIC0.19□□□□□ -2.38
COL12A1Q99715 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.19□□□□□ -2.38
COL12A1Q99715 MTND4P16-201ENST00000466108 1367 ntBASIC0.19□□□□□ -2.38
COL12A1Q99715 AC010329.5-201ENST00000623497 2174 ntBASIC0.19□□□□□ -2.38
COL12A1Q99715 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
COL12A1Q99715 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.19□□□□□ -2.38
COL12A1Q99715 EIF1P1-201ENST00000421436 341 ntBASIC0.19□□□□□ -2.38
COL12A1Q99715 PAXBP1P1-201ENST00000449315 447 ntBASIC0.19□□□□□ -2.38
COL12A1Q99715 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.19□□□□□ -2.38
COL12A1Q99715 RNU6-138P-201ENST00000515952 107 ntBASIC0.19□□□□□ -2.38
COL12A1Q99715 RNU6-491P-201ENST00000516099 110 ntBASIC0.19□□□□□ -2.38
COL12A1Q99715 HSPE1P7-201ENST00000604681 321 ntBASIC0.19□□□□□ -2.38
COL12A1Q99715 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
COL12A1Q99715 RNU1-124P-201ENST00000363861 145 ntBASIC0.18□□□□□ -2.38
COL12A1Q99715 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
COL12A1Q99715 AL138880.1-201ENST00000405824 642 ntBASIC0.18□□□□□ -2.38
COL12A1Q99715 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.18□□□□□ -2.38
COL12A1Q99715 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.18□□□□□ -2.38
COL12A1Q99715 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.18□□□□□ -2.38
COL12A1Q99715 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC0.18□□□□□ -2.38
COL12A1Q99715 AC015849.6-201ENST00000605454 474 ntBASIC0.18□□□□□ -2.38
COL12A1Q99715 AL161629.2-201ENST00000615347 275 ntBASIC0.18□□□□□ -2.38
COL12A1Q99715 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.18□□□□□ -2.38
COL12A1Q99715 Y_RNA.117-201ENST00000363294 101 ntBASIC0.18□□□□□ -2.38
COL12A1Q99715 SNORA4.1-201ENST00000364263 144 ntBASIC0.18□□□□□ -2.38
COL12A1Q99715 RNY3P14-201ENST00000384309 102 ntBASIC0.18□□□□□ -2.38
COL12A1Q99715 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.18□□□□□ -2.38
COL12A1Q99715 PIGFP2-201ENST00000421400 651 ntBASIC0.18□□□□□ -2.38
COL12A1Q99715 MTCO3P45-201ENST00000443036 613 ntBASIC0.18□□□□□ -2.38
COL12A1Q99715 AL589880.1-201ENST00000448271 287 ntBASIC0.18□□□□□ -2.38
COL12A1Q99715 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC0.18□□□□□ -2.38
COL12A1Q99715 AC034114.1-201ENST00000520293 285 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms