Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 PAXBP1P1-201ENST00000449315 447 ntBASIC1.3□□□□□ -2.2
CCL13Q99616 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.3□□□□□ -2.2
CCL13Q99616 USP9YP10-201ENST00000454868 628 ntBASIC1.3□□□□□ -2.2
CCL13Q99616 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.3□□□□□ -2.2
CCL13Q99616 RNU7-59P-201ENST00000459101 61 ntBASIC1.3□□□□□ -2.2
CCL13Q99616 AC023790.1-201ENST00000482174 347 ntBASIC1.3□□□□□ -2.2
CCL13Q99616 RPF2P2-201ENST00000504693 896 ntBASIC1.3□□□□□ -2.2
CCL13Q99616 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
CCL13Q99616 RNU5B-3P-201ENST00000516601 115 ntBASIC1.3□□□□□ -2.2
CCL13Q99616 DUXAP5-201ENST00000529668 529 ntBASIC1.3□□□□□ -2.2
CCL13Q99616 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.3□□□□□ -2.2
CCL13Q99616 MIR4782-201ENST00000577987 79 ntBASIC1.3□□□□□ -2.2
CCL13Q99616 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.3□□□□□ -2.2
CCL13Q99616 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.3□□□□□ -2.2
CCL13Q99616 RNU6-91P-201ENST00000607774 107 ntBASIC1.3□□□□□ -2.2
CCL13Q99616 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.3□□□□□ -2.2
CCL13Q99616 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CCL13Q99616 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CCL13Q99616 AC138393.1-203ENST00000327086 343 ntBASIC1.29□□□□□ -2.2
CCL13Q99616 RNU5E-1-201ENST00000362477 120 ntBASIC1.29□□□□□ -2.2
CCL13Q99616 RNU6-777P-201ENST00000364265 104 ntBASIC1.29□□□□□ -2.2
CCL13Q99616 RNU6-1032P-201ENST00000384100 107 ntBASIC1.29□□□□□ -2.2
CCL13Q99616 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.29□□□□□ -2.2
CCL13Q99616 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.29□□□□□ -2.2
CCL13Q99616 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.29□□□□□ -2.2
CCL13Q99616 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.29□□□□□ -2.2
CCL13Q99616 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.29□□□□□ -2.2
CCL13Q99616 MTND2P29-201ENST00000438595 412 ntBASIC1.29□□□□□ -2.2
CCL13Q99616 AC087884.1-201ENST00000469738 328 ntBASIC1.29□□□□□ -2.2
CCL13Q99616 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.29□□□□□ -2.2
CCL13Q99616 AC023194.1-201ENST00000493084 308 ntBASIC1.29□□□□□ -2.2
CCL13Q99616 AC034222.1-201ENST00000494052 532 ntBASIC1.29□□□□□ -2.2
CCL13Q99616 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.29□□□□□ -2.2
CCL13Q99616 AC113347.3-201ENST00000509113 148 ntBASIC1.29□□□□□ -2.2
CCL13Q99616 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CCL13Q99616 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
CCL13Q99616 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.29□□□□□ -2.2
CCL13Q99616 HSBP1P1-201ENST00000555205 166 ntBASIC1.29□□□□□ -2.2
CCL13Q99616 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.29□□□□□ -2.2
CCL13Q99616 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.29□□□□□ -2.2
CCL13Q99616 MIR4713-201ENST00000582691 75 ntBASIC1.29□□□□□ -2.2
CCL13Q99616 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.29□□□□□ -2.2
CCL13Q99616 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.29□□□□□ -2.2
CCL13Q99616 AC124016.2-201ENST00000610058 665 ntBASIC1.29□□□□□ -2.2
CCL13Q99616 AC018926.1-201ENST00000616335 435 ntBASIC1.29□□□□□ -2.2
CCL13Q99616 AL512427.1-201ENST00000618593 349 ntBASIC1.29□□□□□ -2.2
CCL13Q99616 AC099654.9-201ENST00000637055 678 ntBASIC1.29□□□□□ -2.2
CCL13Q99616 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
CCL13Q99616 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CCL13Q99616 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.28□□□□□ -2.2
CCL13Q99616 RNU1-42P-201ENST00000364033 160 ntBASIC1.28□□□□□ -2.2
CCL13Q99616 RNU4-42P-201ENST00000364738 142 ntBASIC1.28□□□□□ -2.2
CCL13Q99616 SNORA67.6-201ENST00000391093 99 ntBASIC1.28□□□□□ -2.2
CCL13Q99616 MIR1323-201ENST00000408090 73 ntBASIC1.28□□□□□ -2.2
CCL13Q99616 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.28□□□□□ -2.2
CCL13Q99616 MIR1304-201ENST00000408243 91 ntBASIC1.28□□□□□ -2.2
CCL13Q99616 MIR1284-201ENST00000408337 120 ntBASIC1.28□□□□□ -2.2
CCL13Q99616 VN1R36P-201ENST00000414936 291 ntBASIC1.28□□□□□ -2.2
CCL13Q99616 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.28□□□□□ -2.2
CCL13Q99616 RPL23AP76-201ENST00000441860 458 ntBASIC1.28□□□□□ -2.2
CCL13Q99616 EEF1E1P1-201ENST00000446998 430 ntBASIC1.28□□□□□ -2.2
CCL13Q99616 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.28□□□□□ -2.2
CCL13Q99616 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.28□□□□□ -2.2
CCL13Q99616 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.28□□□□□ -2.2
CCL13Q99616 AC006512.1-201ENST00000468816 291 ntBASIC1.28□□□□□ -2.2
CCL13Q99616 RPL7P43-201ENST00000478876 753 ntBASIC1.28□□□□□ -2.2
CCL13Q99616 AC008837.2-201ENST00000513076 418 ntBASIC1.28□□□□□ -2.2
CCL13Q99616 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.28□□□□□ -2.2
CCL13Q99616 AC015720.1-201ENST00000565251 277 ntBASIC1.28□□□□□ -2.2
CCL13Q99616 AC022254.1-201ENST00000567857 235 ntBASIC1.28□□□□□ -2.2
CCL13Q99616 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CCL13Q99616 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.28□□□□□ -2.2
CCL13Q99616 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.28□□□□□ -2.2
CCL13Q99616 AL670379.10-201ENST00000604330 253 ntBASIC1.28□□□□□ -2.2
CCL13Q99616 AL670379.9-201ENST00000605428 253 ntBASIC1.28□□□□□ -2.2
CCL13Q99616 AL133445.2-201ENST00000611191 527 ntBASIC1.28□□□□□ -2.2
CCL13Q99616 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.28□□□□□ -2.2
CCL13Q99616 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.28□□□□□ -2.2
CCL13Q99616 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CCL13Q99616 TEX21P-201ENST00000447107 1476 ntBASIC1.28□□□□□ -2.2
CCL13Q99616 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CCL13Q99616 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CCL13Q99616 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.27□□□□□ -2.21
CCL13Q99616 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CCL13Q99616 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.27□□□□□ -2.21
CCL13Q99616 SNORD115-3-201ENST00000363100 82 ntBASIC1.27□□□□□ -2.21
CCL13Q99616 RNU6-457P-201ENST00000363999 107 ntBASIC1.27□□□□□ -2.21
CCL13Q99616 RNU6-898P-201ENST00000365627 104 ntBASIC1.27□□□□□ -2.21
CCL13Q99616 RNU1-57P-201ENST00000384491 166 ntBASIC1.27□□□□□ -2.21
CCL13Q99616 MIR517C-201ENST00000385103 95 ntBASIC1.27□□□□□ -2.21
CCL13Q99616 MIR1283-2-201ENST00000408621 87 ntBASIC1.27□□□□□ -2.21
CCL13Q99616 AP000542.1-201ENST00000448473 371 ntBASIC1.27□□□□□ -2.21
CCL13Q99616 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.27□□□□□ -2.21
CCL13Q99616 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.27□□□□□ -2.21
CCL13Q99616 AMD1P1-201ENST00000457220 922 ntBASIC1.27□□□□□ -2.21
CCL13Q99616 AC104629.1-201ENST00000494226 508 ntBASIC1.27□□□□□ -2.21
CCL13Q99616 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.27□□□□□ -2.21
CCL13Q99616 RNU6-64P-201ENST00000517119 105 ntBASIC1.27□□□□□ -2.21
CCL13Q99616 RNU6-667P-201ENST00000517186 102 ntBASIC1.27□□□□□ -2.21
CCL13Q99616 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms