Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 MTND2P22-201ENST00000444325 1033 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.05□□□□□ -2.08
SCN2AQ99250 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.05□□□□□ -2.08
SCN2AQ99250 AF131216.2-201ENST00000512316 564 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.05□□□□□ -2.08
SCN2AQ99250 ADI1P3-201ENST00000549509 470 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.05□□□□□ -2.08
SCN2AQ99250 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.05□□□□□ -2.08
SCN2AQ99250 MIR4782-201ENST00000577987 79 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 AL356280.1-201ENST00000603614 379 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 MIR15A-201ENST00000607334 83 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.05□□□□□ -2.08
SCN2AQ99250 AC009161.2-201ENST00000624626 138 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SCN2AQ99250 RNU1-109P-201ENST00000383960 147 ntBASIC2.04□□□□□ -2.08
SCN2AQ99250 SNORA64-201ENST00000384674 134 ntBASIC2.04□□□□□ -2.08
SCN2AQ99250 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.04□□□□□ -2.08
SCN2AQ99250 NDUFS5P4-201ENST00000412983 318 ntBASIC2.04□□□□□ -2.08
SCN2AQ99250 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.04□□□□□ -2.08
SCN2AQ99250 AL109913.1-201ENST00000421173 514 ntBASIC2.04□□□□□ -2.08
SCN2AQ99250 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.04□□□□□ -2.08
SCN2AQ99250 ISCA1P1-201ENST00000426679 387 ntBASIC2.04□□□□□ -2.08
SCN2AQ99250 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.04□□□□□ -2.08
SCN2AQ99250 MTND1P28-201ENST00000435623 950 ntBASIC2.04□□□□□ -2.08
SCN2AQ99250 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.04□□□□□ -2.08
SCN2AQ99250 BRK1P2-201ENST00000442875 223 ntBASIC2.04□□□□□ -2.08
SCN2AQ99250 NEFMP1-201ENST00000443423 1006 ntBASIC2.04□□□□□ -2.08
SCN2AQ99250 RPL31P3-201ENST00000458430 332 ntBASIC2.04□□□□□ -2.08
SCN2AQ99250 MTND4LP3-201ENST00000468320 276 ntBASIC2.04□□□□□ -2.08
SCN2AQ99250 AC116337.2-201ENST00000477662 156 ntBASIC2.04□□□□□ -2.08
SCN2AQ99250 RPS29P20-201ENST00000489592 171 ntBASIC2.04□□□□□ -2.08
SCN2AQ99250 RAC1P5-201ENST00000512182 576 ntBASIC2.04□□□□□ -2.08
SCN2AQ99250 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.04□□□□□ -2.08
SCN2AQ99250 AC025755.1-201ENST00000521306 278 ntBASIC2.04□□□□□ -2.08
SCN2AQ99250 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.04□□□□□ -2.08
SCN2AQ99250 AL359212.1-201ENST00000556608 614 ntBASIC2.04□□□□□ -2.08
SCN2AQ99250 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.04□□□□□ -2.08
SCN2AQ99250 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.04□□□□□ -2.08
SCN2AQ99250 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.04□□□□□ -2.08
SCN2AQ99250 AC024619.4-201ENST00000580924 316 ntBASIC2.04□□□□□ -2.08
SCN2AQ99250 AC119751.7-201ENST00000600494 245 ntBASIC2.04□□□□□ -2.08
SCN2AQ99250 AC121247.2-201ENST00000604776 136 ntBASIC2.04□□□□□ -2.08
SCN2AQ99250 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.04□□□□□ -2.08
SCN2AQ99250 AC009090.3-201ENST00000616553 565 ntBASIC2.04□□□□□ -2.08
SCN2AQ99250 AC244517.12-201ENST00000623581 663 ntBASIC2.04□□□□□ -2.08
SCN2AQ99250 CU459211.1-201ENST00000635667 749 ntBASIC2.04□□□□□ -2.08
SCN2AQ99250 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SCN2AQ99250 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.03□□□□□ -2.08
SCN2AQ99250 RNU5E-1-201ENST00000362477 120 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 Y_RNA.51-201ENST00000362725 102 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 RNU6-61P-201ENST00000365528 109 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 RNU6-517P-201ENST00000384362 110 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.03□□□□□ -2.08
SCN2AQ99250 MTCO3P5-201ENST00000433620 714 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 AC119618.1-201ENST00000434191 222 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.03□□□□□ -2.08
SCN2AQ99250 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.03□□□□□ -2.08
SCN2AQ99250 AC079781.2-201ENST00000446424 169 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.03□□□□□ -2.08
SCN2AQ99250 DUXAP5-201ENST00000529668 529 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 AC087241.2-201ENST00000535801 324 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.03□□□□□ -2.08
SCN2AQ99250 SNRPGP18-201ENST00000553000 214 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.03□□□□□ -2.08
SCN2AQ99250 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.03□□□□□ -2.08
SCN2AQ99250 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.03□□□□□ -2.08
SCN2AQ99250 MIR5002-201ENST00000584713 97 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 AC130324.3-201ENST00000614165 542 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.03□□□□□ -2.08
SCN2AQ99250 AC005336.3-201ENST00000623833 2679 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SCN2AQ99250 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SCN2AQ99250 RNU6-1167P-201ENST00000363227 94 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 RNU2-3P-201ENST00000410144 191 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 RPL19P1-201ENST00000411635 428 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.03□□□□□ -2.08
SCN2AQ99250 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.03□□□□□ -2.08
SCN2AQ99250 AL118520.1-201ENST00000450770 291 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.03□□□□□ -2.08
SCN2AQ99250 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.03□□□□□ -2.08
SCN2AQ99250 RPL21P99-201ENST00000480369 423 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.03□□□□□ -2.08
SCN2AQ99250 MTCO3P7-201ENST00000510008 774 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 AC117522.2-201ENST00000510049 657 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 SCARNA3-201ENST00000517097 143 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.03□□□□□ -2.08
SCN2AQ99250 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.03□□□□□ -2.08
SCN2AQ99250 AC007151.1-201ENST00000572774 483 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 BNIP3P9-201ENST00000603714 553 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 SEPT7P9-203ENST00000604116 343 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 AC126118.1-201ENST00000607744 628 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 DUSP12P1-201ENST00000612874 516 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 MIR6863-201ENST00000636112 90 ntBASIC2.03□□□□□ -2.08
SCN2AQ99250 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.03□□□□□ -2.08
SCN2AQ99250 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.02□□□□□ -2.09
SCN2AQ99250 AC135776.4-201ENST00000624300 1904 ntBASIC2.02□□□□□ -2.09
SCN2AQ99250 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.02□□□□□ -2.09
SCN2AQ99250 SNORA40.18-201ENST00000391200 128 ntBASIC2.02□□□□□ -2.09
SCN2AQ99250 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.02□□□□□ -2.09
SCN2AQ99250 CDK8P2-201ENST00000415020 547 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 256.8 ms