Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AL359511.1-201ENST00000402970 211 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.8□□□□□ -2.12
LINC00477Q96M19 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
LINC00477Q96M19 RPS12P24-201ENST00000412619 387 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.8□□□□□ -2.12
LINC00477Q96M19 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.8□□□□□ -2.12
LINC00477Q96M19 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.8□□□□□ -2.12
LINC00477Q96M19 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.8□□□□□ -2.12
LINC00477Q96M19 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.8□□□□□ -2.12
LINC00477Q96M19 MTCO2P11-201ENST00000431069 680 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 MICF-203ENST00000432679 129 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 AC119618.1-201ENST00000434191 222 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.8□□□□□ -2.12
LINC00477Q96M19 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.8□□□□□ -2.12
LINC00477Q96M19 AL162395.1-201ENST00000457882 422 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 RPL31P3-201ENST00000458430 332 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 RPS27AP10-201ENST00000496103 208 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 MTCO3P9-201ENST00000506989 781 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.8□□□□□ -2.12
LINC00477Q96M19 RNA5SP24-201ENST00000516478 95 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 Y_RNA.689-201ENST00000516589 107 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 RNA5SP290-201ENST00000517133 127 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 HMGN1P28-201ENST00000521340 364 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 MTCYBP20-201ENST00000524239 1129 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
LINC00477Q96M19 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.8□□□□□ -2.12
LINC00477Q96M19 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.8□□□□□ -2.12
LINC00477Q96M19 AC009063.1-201ENST00000563342 702 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 AC025678.1-201ENST00000567861 338 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 AGGF1P4-201ENST00000568249 801 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 AC105137.2-201ENST00000569073 466 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 AC103987.3-201ENST00000582071 292 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.8□□□□□ -2.12
LINC00477Q96M19 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.8□□□□□ -2.12
LINC00477Q96M19 DEFB131E-202ENST00000602581 683 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 AL359999.1-201ENST00000604513 294 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 AC007938.3-201ENST00000604965 623 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 SNORD14A-201ENST00000606526 91 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 MIR15A-201ENST00000607334 83 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 AC022893.3-201ENST00000607665 437 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 AL137847.3-201ENST00000611521 109 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 AC135507.2-201ENST00000612443 309 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.8□□□□□ -2.12
LINC00477Q96M19 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.8□□□□□ -2.12
LINC00477Q96M19 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
LINC00477Q96M19 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
LINC00477Q96M19 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
LINC00477Q96M19 MTND4P35-201ENST00000604257 1375 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.8□□□□□ -2.12
LINC00477Q96M19 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
LINC00477Q96M19 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
LINC00477Q96M19 CKAP2P1-201ENST00000555477 2049 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
LINC00477Q96M19 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.79□□□□□ -2.12
LINC00477Q96M19 MIR21-201ENST00000362134 72 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 RNU6-181P-201ENST00000363225 107 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 SNORA3A-201ENST00000364113 130 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 RNU6-61P-201ENST00000365528 109 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 MIR196B-201ENST00000384852 84 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
LINC00477Q96M19 SNORA11.1-201ENST00000408133 129 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 RNU2-66P-201ENST00000410650 161 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 RNU2-49P-201ENST00000410666 184 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
LINC00477Q96M19 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.79□□□□□ -2.12
LINC00477Q96M19 OR51A5P-201ENST00000415429 942 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.79□□□□□ -2.12
LINC00477Q96M19 MTND1P23-201ENST00000416931 372 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.79□□□□□ -2.12
LINC00477Q96M19 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.79□□□□□ -2.12
LINC00477Q96M19 AL353193.1-201ENST00000421444 268 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 AL365338.1-201ENST00000422282 858 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
LINC00477Q96M19 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.79□□□□□ -2.12
LINC00477Q96M19 ZNF863P-201ENST00000426746 417 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.79□□□□□ -2.12
LINC00477Q96M19 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.79□□□□□ -2.12
LINC00477Q96M19 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.79□□□□□ -2.12
LINC00477Q96M19 SNRPEP9-201ENST00000436794 238 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 AC073614.1-201ENST00000438690 650 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 MTATP6P7-201ENST00000453315 681 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 RPS3AP14-201ENST00000483907 780 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 RPS27P21-201ENST00000486977 252 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 MTND2P33-201ENST00000506452 1031 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.79□□□□□ -2.12
LINC00477Q96M19 RNU6-914P-201ENST00000516749 109 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 RNU6-445P-201ENST00000516949 107 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.79□□□□□ -2.12
LINC00477Q96M19 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.79□□□□□ -2.12
LINC00477Q96M19 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.79□□□□□ -2.12
LINC00477Q96M19 RPS3AP4-201ENST00000555161 764 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.79□□□□□ -2.12
LINC00477Q96M19 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.79□□□□□ -2.12
LINC00477Q96M19 SNORD53-201ENST00000579969 78 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 AL391646.1-201ENST00000603860 190 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 AL033523.1-201ENST00000605153 153 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 AC005000.2-201ENST00000605468 310 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 MIR98-201ENST00000606724 119 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 AC126118.1-201ENST00000607744 628 ntBASIC1.79□□□□□ -2.12
LINC00477Q96M19 AC097065.2-201ENST00000608159 533 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms