Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AL021997.1-201ENST00000605757 193 ntBASIC2.15□□□□□ -2.07
USP47Q96K76 AC012360.2-201ENST00000609349 391 ntBASIC2.15□□□□□ -2.07
USP47Q96K76 AP002791.1-201ENST00000623291 381 ntBASIC2.15□□□□□ -2.07
USP47Q96K76 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.15□□□□□ -2.07
USP47Q96K76 AC099654.9-201ENST00000637055 678 ntBASIC2.15□□□□□ -2.07
USP47Q96K76 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
USP47Q96K76 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
USP47Q96K76 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.14□□□□□ -2.07
USP47Q96K76 RNU1-52P-201ENST00000384190 164 ntBASIC2.14□□□□□ -2.07
USP47Q96K76 AL030996.1-201ENST00000411430 235 ntBASIC2.14□□□□□ -2.07
USP47Q96K76 POLHP1-201ENST00000411806 470 ntBASIC2.14□□□□□ -2.07
USP47Q96K76 RPL36AP53-201ENST00000432891 316 ntBASIC2.14□□□□□ -2.07
USP47Q96K76 USP9YP24-201ENST00000434374 697 ntBASIC2.14□□□□□ -2.07
USP47Q96K76 USP9YP17-201ENST00000444617 696 ntBASIC2.14□□□□□ -2.07
USP47Q96K76 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
USP47Q96K76 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.14□□□□□ -2.07
USP47Q96K76 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.14□□□□□ -2.07
USP47Q96K76 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.14□□□□□ -2.07
USP47Q96K76 AC139453.3-201ENST00000493276 369 ntBASIC2.14□□□□□ -2.07
USP47Q96K76 SCARNA3-201ENST00000517097 143 ntBASIC2.14□□□□□ -2.07
USP47Q96K76 AC010186.2-204ENST00000537668 439 ntBASIC2.14□□□□□ -2.07
USP47Q96K76 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
USP47Q96K76 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.14□□□□□ -2.07
USP47Q96K76 MIR3167-201ENST00000579623 85 ntBASIC2.14□□□□□ -2.07
USP47Q96K76 MIR544B-201ENST00000582372 78 ntBASIC2.14□□□□□ -2.07
USP47Q96K76 AC091057.3-201ENST00000602684 733 ntBASIC2.14□□□□□ -2.07
USP47Q96K76 AC008121.1-201ENST00000603244 268 ntBASIC2.14□□□□□ -2.07
USP47Q96K76 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.14□□□□□ -2.07
USP47Q96K76 AC007490.1-201ENST00000624321 703 ntBASIC2.14□□□□□ -2.07
USP47Q96K76 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
USP47Q96K76 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.13□□□□□ -2.07
USP47Q96K76 RNU6-658P-201ENST00000384606 106 ntBASIC2.13□□□□□ -2.07
USP47Q96K76 MIR320A-201ENST00000385302 82 ntBASIC2.13□□□□□ -2.07
USP47Q96K76 RNU6-757P-201ENST00000410334 100 ntBASIC2.13□□□□□ -2.07
USP47Q96K76 AC104651.1-201ENST00000427559 735 ntBASIC2.13□□□□□ -2.07
USP47Q96K76 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.13□□□□□ -2.07
USP47Q96K76 HMGN2P10-201ENST00000448085 265 ntBASIC2.13□□□□□ -2.07
USP47Q96K76 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.13□□□□□ -2.07
USP47Q96K76 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.13□□□□□ -2.07
USP47Q96K76 RPL23AP35-201ENST00000451906 501 ntBASIC2.13□□□□□ -2.07
USP47Q96K76 AL137159.1-201ENST00000452808 512 ntBASIC2.13□□□□□ -2.07
USP47Q96K76 FABP5P15-201ENST00000453566 214 ntBASIC2.13□□□□□ -2.07
USP47Q96K76 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.13□□□□□ -2.07
USP47Q96K76 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.13□□□□□ -2.07
USP47Q96K76 AP000907.2-201ENST00000530827 353 ntBASIC2.13□□□□□ -2.07
USP47Q96K76 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.13□□□□□ -2.07
USP47Q96K76 MRPS36P5-201ENST00000551909 298 ntBASIC2.13□□□□□ -2.07
USP47Q96K76 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.13□□□□□ -2.07
USP47Q96K76 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.13□□□□□ -2.07
USP47Q96K76 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.13□□□□□ -2.07
USP47Q96K76 MIR4293-201ENST00000584305 78 ntBASIC2.13□□□□□ -2.07
USP47Q96K76 BNIP3P23-201ENST00000599655 511 ntBASIC2.13□□□□□ -2.07
USP47Q96K76 VN1R82P-201ENST00000601481 356 ntBASIC2.13□□□□□ -2.07
USP47Q96K76 AC012493.3-201ENST00000604494 112 ntBASIC2.13□□□□□ -2.07
USP47Q96K76 AC025594.3-201ENST00000613068 790 ntBASIC2.13□□□□□ -2.07
USP47Q96K76 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.13□□□□□ -2.07
USP47Q96K76 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.13□□□□□ -2.07
USP47Q96K76 AP000484.1-201ENST00000620067 1252 ntBASIC2.13□□□□□ -2.07
USP47Q96K76 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.13□□□□□ -2.07
USP47Q96K76 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.13□□□□□ -2.07
USP47Q96K76 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
USP47Q96K76 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
USP47Q96K76 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.12□□□□□ -2.07
USP47Q96K76 RNU1-42P-201ENST00000364033 160 ntBASIC2.12□□□□□ -2.07
USP47Q96K76 RNU6-920P-201ENST00000410926 92 ntBASIC2.12□□□□□ -2.07
USP47Q96K76 VPS26BP1-201ENST00000417155 755 ntBASIC2.12□□□□□ -2.07
USP47Q96K76 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.12□□□□□ -2.07
USP47Q96K76 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.12□□□□□ -2.07
USP47Q96K76 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.12□□□□□ -2.07
USP47Q96K76 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.12□□□□□ -2.07
USP47Q96K76 ISCA1P1-201ENST00000426679 387 ntBASIC2.12□□□□□ -2.07
USP47Q96K76 MICF-203ENST00000432679 129 ntBASIC2.12□□□□□ -2.07
USP47Q96K76 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.12□□□□□ -2.07
USP47Q96K76 FABP5P14-201ENST00000437273 393 ntBASIC2.12□□□□□ -2.07
USP47Q96K76 AL161651.1-201ENST00000440882 223 ntBASIC2.12□□□□□ -2.07
USP47Q96K76 AL139109.1-201ENST00000455491 297 ntBASIC2.12□□□□□ -2.07
USP47Q96K76 ANKRD26P4-201ENST00000455755 950 ntBASIC2.12□□□□□ -2.07
USP47Q96K76 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.12□□□□□ -2.07
USP47Q96K76 RNU6-703P-201ENST00000516946 107 ntBASIC2.12□□□□□ -2.07
USP47Q96K76 AC006199.1-201ENST00000548728 219 ntBASIC2.12□□□□□ -2.07
USP47Q96K76 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.12□□□□□ -2.07
USP47Q96K76 AC015720.1-201ENST00000565251 277 ntBASIC2.12□□□□□ -2.07
USP47Q96K76 AGGF1P5-201ENST00000567900 919 ntBASIC2.12□□□□□ -2.07
USP47Q96K76 AC136618.2-201ENST00000575091 400 ntBASIC2.12□□□□□ -2.07
USP47Q96K76 MIR3122-201ENST00000577243 73 ntBASIC2.12□□□□□ -2.07
USP47Q96K76 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.12□□□□□ -2.07
USP47Q96K76 AC025588.2-201ENST00000604851 466 ntBASIC2.12□□□□□ -2.07
USP47Q96K76 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.12□□□□□ -2.07
USP47Q96K76 AL449363.1-201ENST00000617815 186 ntBASIC2.12□□□□□ -2.07
USP47Q96K76 AC010608.3-201ENST00000625048 527 ntBASIC2.12□□□□□ -2.07
USP47Q96K76 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
USP47Q96K76 AC103710.2-202ENST00000641454 2853 ntBASIC2.12□□□□□ -2.07
USP47Q96K76 ZNF29P-201ENST00000225587 168 ntBASIC2.11□□□□□ -2.07
USP47Q96K76 RNU6-60P-201ENST00000364792 103 ntBASIC2.11□□□□□ -2.07
USP47Q96K76 RNU6-174P-201ENST00000410406 106 ntBASIC2.11□□□□□ -2.07
USP47Q96K76 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.11□□□□□ -2.07
USP47Q96K76 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.11□□□□□ -2.07
USP47Q96K76 AC007560.1-201ENST00000426912 237 ntBASIC2.11□□□□□ -2.07
USP47Q96K76 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.11□□□□□ -2.07
USP47Q96K76 Z73417.1-201ENST00000447373 778 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms