Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 RNU6-201P-201ENST00000517100 61 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 SNORA31.25-201ENST00000517242 134 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 AC079598.5-201ENST00000547460 117 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 ARL2BPP2-201ENST00000550907 489 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 AC110588.1-201ENST00000559699 137 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 MIR3126-201ENST00000577443 74 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 AC078899.2-201ENST00000595282 212 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 BNIP3P9-201ENST00000603714 553 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 AL670379.6-201ENST00000603753 252 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 AL670379.11-201ENST00000604059 253 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 AC104763.2-201ENST00000604179 382 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 AC008162.1-201ENST00000604718 254 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 AL670379.1-201ENST00000604752 252 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 AL670379.5-201ENST00000605253 252 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 AL670379.12-201ENST00000605291 253 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 AL670379.8-201ENST00000605353 252 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 AL670379.7-201ENST00000605823 252 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 MTND5P42-201ENST00000637720 498 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 TEX21P-201ENST00000447107 1476 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 MTND4P16-201ENST00000466108 1367 ntBASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 Y_RNA.302-201ENST00000364997 102 ntBASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 RNU6-1140P-201ENST00000410517 106 ntBASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 RNU2-63P-201ENST00000410792 194 ntBASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 AL353621.1-201ENST00000418219 243 ntBASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 AC097463.2-201ENST00000421074 142 ntBASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 SNORD97-201ENST00000459187 142 ntBASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 AC091951.3-201ENST00000504093 246 ntBASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 AC116655.1-201ENST00000508324 901 ntBASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 RNU5A-4P-201ENST00000516588 111 ntBASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 ACA59.2-201ENST00000517061 156 ntBASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 RNU2-19P-201ENST00000517288 84 ntBASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 AC023050.2-201ENST00000544968 387 ntBASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 BNIP3P40-201ENST00000596017 556 ntBASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 MTCYBP22-201ENST00000603788 447 ntBASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 AL138963.2-201ENST00000605137 226 ntBASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 AL139022.2-201ENST00000606934 443 ntBASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 AC144521.1-201ENST00000607148 956 ntBASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 AC092106.3-201ENST00000611308 722 ntBASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 SDR42E1P4-201ENST00000620894 481 ntBASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 AC091932.3-201ENST00000624223 323 ntBASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 Z99571.1-201ENST00000636677 394 ntBASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 U6.99-201ENST00000637524 83 ntBASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 AC103706.2-201ENST00000638080 240 ntBASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
ECHDC3Q96DC8 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
ECHDC3Q96DC8 AL391994.1-201ENST00000254724 282 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 Y_RNA.97-201ENST00000363094 102 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 RNY3P13-201ENST00000365542 102 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 MIR95-201ENST00000385072 81 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 SNORA40C-201ENST00000391285 128 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 RPS20P2-201ENST00000402520 389 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 RNU2-36P-201ENST00000410361 191 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 AL353777.1-201ENST00000425552 326 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 MTND1P20-201ENST00000430341 950 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 RPS15AP9-201ENST00000439856 381 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 RNA5SP233-201ENST00000459153 113 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 RPL21P99-201ENST00000480369 423 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 MTND1P3-201ENST00000484956 952 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 AC107032.1-201ENST00000485945 480 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 AC007182.2-201ENST00000489251 402 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 CKS1BP2-201ENST00000497342 240 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 SMURF2P1-201ENST00000514992 481 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 MTATP6P15-201ENST00000527233 835 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 LINC00933-203ENST00000559812 219 ntBASIC1.9□□□□□ -2.11
ECHDC3Q96DC8 AC012213.3-201ENST00000577199 777 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms