Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HPS1Q92902 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.83□□□□□ -1.64
HPS1Q92902 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HPS1Q92902 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HPS1Q92902 AC093535.2-201ENST00000624769 2326 ntBASIC4.83□□□□□ -1.64
HPS1Q92902 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HPS1Q92902 RNU6-597P-201ENST00000365620 102 ntBASIC4.83□□□□□ -1.64
HPS1Q92902 MIR105-2-201ENST00000385083 81 ntBASIC4.83□□□□□ -1.64
HPS1Q92902 MT-TT-201ENST00000387460 66 ntBASIC4.83□□□□□ -1.64
HPS1Q92902 AL606845.1-201ENST00000404881 255 ntBASIC4.83□□□□□ -1.64
HPS1Q92902 RN7SKP125-201ENST00000410481 302 ntBASIC4.83□□□□□ -1.64
HPS1Q92902 RNU4-43P-201ENST00000410628 137 ntBASIC4.83□□□□□ -1.64
HPS1Q92902 RNA5SP31-201ENST00000411144 127 ntBASIC4.83□□□□□ -1.64
HPS1Q92902 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.83□□□□□ -1.64
HPS1Q92902 OR2AM1P-201ENST00000422137 422 ntBASIC4.83□□□□□ -1.64
HPS1Q92902 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.83□□□□□ -1.64
HPS1Q92902 TMEM183AP1-205ENST00000432739 290 ntBASIC4.83□□□□□ -1.64
HPS1Q92902 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.83□□□□□ -1.64
HPS1Q92902 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.83□□□□□ -1.64
HPS1Q92902 RNU6-1061P-201ENST00000516530 99 ntBASIC4.83□□□□□ -1.64
HPS1Q92902 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.83□□□□□ -1.64
HPS1Q92902 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.83□□□□□ -1.64
HPS1Q92902 RN7SL52P-201ENST00000584271 284 ntBASIC4.83□□□□□ -1.64
HPS1Q92902 AC108738.1-201ENST00000603703 237 ntBASIC4.83□□□□□ -1.64
HPS1Q92902 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.83□□□□□ -1.64
HPS1Q92902 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.83□□□□□ -1.64
HPS1Q92902 AC015914.2-201ENST00000618167 288 ntBASIC4.83□□□□□ -1.64
HPS1Q92902 AL121890.5-201ENST00000620848 304 ntBASIC4.83□□□□□ -1.64
HPS1Q92902 AP001005.3-201ENST00000622049 129 ntBASIC4.83□□□□□ -1.64
HPS1Q92902 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HPS1Q92902 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HPS1Q92902 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HPS1Q92902 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HPS1Q92902 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.82□□□□□ -1.64
HPS1Q92902 AC018555.1-201ENST00000567548 1980 ntBASIC4.82□□□□□ -1.64
HPS1Q92902 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HPS1Q92902 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
HPS1Q92902 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.82□□□□□ -1.64
HPS1Q92902 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.82□□□□□ -1.64
HPS1Q92902 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HPS1Q92902 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HPS1Q92902 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HPS1Q92902 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HPS1Q92902 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HPS1Q92902 RNU6-640P-201ENST00000363693 105 ntBASIC4.82□□□□□ -1.64
HPS1Q92902 RNU6-324P-201ENST00000363957 106 ntBASIC4.82□□□□□ -1.64
HPS1Q92902 Y_RNA.348-201ENST00000365403 103 ntBASIC4.82□□□□□ -1.64
HPS1Q92902 AC068538.1-201ENST00000376856 336 ntBASIC4.82□□□□□ -1.64
HPS1Q92902 RNU6-793P-201ENST00000384233 104 ntBASIC4.82□□□□□ -1.64
HPS1Q92902 SNORA66-201ENST00000384792 133 ntBASIC4.82□□□□□ -1.64
HPS1Q92902 RNU6-837P-201ENST00000391056 108 ntBASIC4.82□□□□□ -1.64
HPS1Q92902 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.82□□□□□ -1.64
HPS1Q92902 MIR1178-201ENST00000408396 91 ntBASIC4.82□□□□□ -1.64
HPS1Q92902 AC007738.1-201ENST00000413892 348 ntBASIC4.82□□□□□ -1.64
HPS1Q92902 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.82□□□□□ -1.64
HPS1Q92902 AL355433.1-201ENST00000422804 300 ntBASIC4.82□□□□□ -1.64
HPS1Q92902 FTH1P6-201ENST00000430768 320 ntBASIC4.82□□□□□ -1.64
HPS1Q92902 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.82□□□□□ -1.64
HPS1Q92902 EEF1B2P6-201ENST00000445713 673 ntBASIC4.82□□□□□ -1.64
HPS1Q92902 RPL10P17-201ENST00000453852 316 ntBASIC4.82□□□□□ -1.64
HPS1Q92902 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.82□□□□□ -1.64
HPS1Q92902 RPS23P6-201ENST00000466136 431 ntBASIC4.82□□□□□ -1.64
HPS1Q92902 RPL23AP70-201ENST00000483361 460 ntBASIC4.82□□□□□ -1.64
HPS1Q92902 Y_RNA.685-201ENST00000516532 108 ntBASIC4.82□□□□□ -1.64
HPS1Q92902 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.82□□□□□ -1.64
HPS1Q92902 AC006199.1-201ENST00000548728 219 ntBASIC4.82□□□□□ -1.64
HPS1Q92902 AC096996.1-201ENST00000563813 325 ntBASIC4.82□□□□□ -1.64
HPS1Q92902 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.82□□□□□ -1.64
HPS1Q92902 AC068647.1-201ENST00000489539 2265 ntBASIC4.82□□□□□ -1.64
HPS1Q92902 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
HPS1Q92902 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
HPS1Q92902 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HPS1Q92902 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HPS1Q92902 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HPS1Q92902 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HPS1Q92902 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HPS1Q92902 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
HPS1Q92902 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HPS1Q92902 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HPS1Q92902 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.81□□□□□ -1.64
HPS1Q92902 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
HPS1Q92902 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HPS1Q92902 AL159987.1-201ENST00000347911 293 ntBASIC4.81□□□□□ -1.64
HPS1Q92902 Y_RNA.229-201ENST00000364347 113 ntBASIC4.81□□□□□ -1.64
HPS1Q92902 RNU6-1082P-201ENST00000364574 107 ntBASIC4.81□□□□□ -1.64
HPS1Q92902 SNORD58C-201ENST00000365223 64 ntBASIC4.81□□□□□ -1.64
HPS1Q92902 SNORA20B-201ENST00000384220 132 ntBASIC4.81□□□□□ -1.64
HPS1Q92902 RNU6-19P-201ENST00000384718 107 ntBASIC4.81□□□□□ -1.64
HPS1Q92902 MIR130A-201ENST00000385274 89 ntBASIC4.81□□□□□ -1.64
HPS1Q92902 RPS26P42-201ENST00000413485 326 ntBASIC4.81□□□□□ -1.64
HPS1Q92902 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.81□□□□□ -1.64
HPS1Q92902 GPM6BP3-201ENST00000442797 145 ntBASIC4.81□□□□□ -1.64
HPS1Q92902 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.81□□□□□ -1.64
HPS1Q92902 OR2AO1P-201ENST00000476497 403 ntBASIC4.81□□□□□ -1.64
HPS1Q92902 AL132838.2-201ENST00000492041 314 ntBASIC4.81□□□□□ -1.64
HPS1Q92902 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.81□□□□□ -1.64
HPS1Q92902 SCARNA15.2-201ENST00000516409 127 ntBASIC4.81□□□□□ -1.64
HPS1Q92902 AP004607.1-201ENST00000524456 203 ntBASIC4.81□□□□□ -1.64
HPS1Q92902 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.81□□□□□ -1.64
HPS1Q92902 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms