Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LMO3Q8TAP4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LMO3Q8TAP4 SNORD113-7-201ENST00000363762 77 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 SNORA63C-201ENST00000364578 129 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 RNU6-1297P-201ENST00000384415 104 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 MIR181A2-201ENST00000384863 110 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 MIR512-1-201ENST00000384913 84 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 EI24P2-201ENST00000397776 1076 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 AL590004.2-201ENST00000404787 371 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 AL138885.1-201ENST00000405921 675 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 RPL5P18-201ENST00000406671 891 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 POLHP1-201ENST00000411806 470 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 AC074085.1-201ENST00000413598 418 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 MTCO2P27-201ENST00000420740 428 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 RPL21P112-201ENST00000434403 463 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 AC090774.1-201ENST00000435925 246 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.08□□□□□ -1.92
LMO3Q8TAP4 CEACAMP4-201ENST00000457676 421 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 SCARNA18-201ENST00000459004 134 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 AC008481.1-201ENST00000463278 396 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LMO3Q8TAP4 HMGB3P15-201ENST00000507326 574 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.08□□□□□ -1.92
LMO3Q8TAP4 RNU6-559P-201ENST00000516151 98 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 Y_RNA.682-201ENST00000516457 100 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 RNU6-566P-201ENST00000516790 107 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.08□□□□□ -1.92
LMO3Q8TAP4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.08□□□□□ -1.92
LMO3Q8TAP4 AL163153.1-201ENST00000554223 283 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 H3F3AP1-201ENST00000559984 334 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 AC012119.1-201ENST00000603184 222 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 AC174048.1-201ENST00000603389 144 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 LLPHP1-201ENST00000603571 367 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.08□□□□□ -1.92
LMO3Q8TAP4 APOOP1-201ENST00000604695 592 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 AC116312.1-201ENST00000606841 314 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.08□□□□□ -1.92
LMO3Q8TAP4 AC084781.2-201ENST00000615568 161 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 AL450472.3-201ENST00000615578 367 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 PLCE1P1-201ENST00000622094 305 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 MTND4LP32-201ENST00000636111 270 ntBASIC3.08□□□□□ -1.92
LMO3Q8TAP4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LMO3Q8TAP4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
LMO3Q8TAP4 AC092593.1-201ENST00000515413 1815 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.07□□□□□ -1.92
LMO3Q8TAP4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LMO3Q8TAP4 AC093010.3-201ENST00000570269 15214 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 RNU6-1249P-201ENST00000363237 111 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 SNORA51.4-201ENST00000364993 124 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 Y_RNA.395-201ENST00000383945 109 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 RNU6-851P-201ENST00000384565 107 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 MIR153-1-201ENST00000384914 90 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 SNORA75.4-201ENST00000391278 119 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 EIF4E2P1-201ENST00000393781 255 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 MIR548P-201ENST00000408336 84 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 RN7SKP158-201ENST00000410453 326 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.07□□□□□ -1.92
LMO3Q8TAP4 PPP1R11P2-201ENST00000423543 382 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 CALM2P2-201ENST00000428512 440 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.07□□□□□ -1.92
LMO3Q8TAP4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LMO3Q8TAP4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.07□□□□□ -1.92
LMO3Q8TAP4 FABP5P14-201ENST00000437273 393 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.07□□□□□ -1.92
LMO3Q8TAP4 BRK1P2-201ENST00000442875 223 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.07□□□□□ -1.92
LMO3Q8TAP4 AC234775.1-201ENST00000454247 670 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.07□□□□□ -1.92
LMO3Q8TAP4 RPL21P103-201ENST00000479921 488 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.07□□□□□ -1.92
LMO3Q8TAP4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.07□□□□□ -1.92
LMO3Q8TAP4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.07□□□□□ -1.92
LMO3Q8TAP4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.07□□□□□ -1.92
LMO3Q8TAP4 RNA5SP309-201ENST00000516670 106 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 RNA5SP454-201ENST00000517231 127 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 AP006587.4-201ENST00000526053 529 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.07□□□□□ -1.92
LMO3Q8TAP4 AC093012.1-202ENST00000549403 582 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 MTCO3P23-201ENST00000561363 289 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 AL080274.1-201ENST00000605565 220 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 AC124303.1-201ENST00000605703 360 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 AC007998.5-201ENST00000622938 237 ntBASIC3.07□□□□□ -1.92
LMO3Q8TAP4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
LMO3Q8TAP4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.07□□□□□ -1.92
LMO3Q8TAP4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
LMO3Q8TAP4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LMO3Q8TAP4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
LMO3Q8TAP4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
LMO3Q8TAP4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
LMO3Q8TAP4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
LMO3Q8TAP4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LMO3Q8TAP4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
LMO3Q8TAP4 SNORA23-201ENST00000365128 182 ntBASIC3.06□□□□□ -1.92
LMO3Q8TAP4 SNORA4.3-201ENST00000365564 137 ntBASIC3.06□□□□□ -1.92
LMO3Q8TAP4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LMO3Q8TAP4 Y_RNA.399-201ENST00000383955 105 ntBASIC3.06□□□□□ -1.92
LMO3Q8TAP4 RNU6-701P-201ENST00000384059 107 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms