Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 MIR548X2-201ENST00000579776 100 ntBASIC4.98□□□□□ -1.61
NEDD1Q8NHV4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.98□□□□□ -1.61
NEDD1Q8NHV4 AC037487.3-201ENST00000606668 112 ntBASIC4.98□□□□□ -1.61
NEDD1Q8NHV4 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.98□□□□□ -1.61
NEDD1Q8NHV4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.98□□□□□ -1.61
NEDD1Q8NHV4 RNA5SP196-201ENST00000625967 102 ntBASIC4.98□□□□□ -1.61
NEDD1Q8NHV4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
NEDD1Q8NHV4 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.98□□□□□ -1.61
NEDD1Q8NHV4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NEDD1Q8NHV4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
NEDD1Q8NHV4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.98□□□□□ -1.61
NEDD1Q8NHV4 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 AC139713.2-215ENST00000641428 5037 ntBASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 RNA5SP391-201ENST00000363456 119 ntBASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 U3.6-201ENST00000363622 211 ntBASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 Y_RNA.571-201ENST00000384753 98 ntBASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 AL022722.2-201ENST00000402519 180 ntBASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 AL357139.1-201ENST00000407792 426 ntBASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 AL353621.1-201ENST00000418219 243 ntBASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 SEPT7P4-201ENST00000437076 306 ntBASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 RN7SL817P-201ENST00000480777 288 ntBASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 AC009127.3-201ENST00000570531 403 ntBASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 MIR3684-201ENST00000579779 74 ntBASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 AL138721.1-201ENST00000616756 179 ntBASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 AC135776.4-201ENST00000624300 1904 ntBASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NEDD1Q8NHV4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
NEDD1Q8NHV4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
NEDD1Q8NHV4 NEAT1-202ENST00000501122 22743 ntBASIC4.96□□□□□ -1.61
NEDD1Q8NHV4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 RNU6-80P-201ENST00000384195 107 ntBASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 SNORD51-201ENST00000384320 80 ntBASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 RNU1-13P-201ENST00000384499 162 ntBASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 RPS15AP40-201ENST00000419621 391 ntBASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 RPS26P47-201ENST00000427219 348 ntBASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 RPL12P46-201ENST00000436610 195 ntBASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 RNA5SP246-201ENST00000458909 119 ntBASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 snoU13.7-201ENST00000459220 104 ntBASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 RPL23AP2-201ENST00000471227 466 ntBASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 AC022795.1-201ENST00000473808 480 ntBASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 RPS26P21-201ENST00000475397 348 ntBASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 RNU1-86P-201ENST00000516108 154 ntBASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 RNA5SP360-201ENST00000516555 118 ntBASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 RNU1-107P-201ENST00000516617 154 ntBASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 SNRPGP16-201ENST00000533275 226 ntBASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 RPL23AP87-202ENST00000573039 466 ntBASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 MIR5692C2-201ENST00000577959 77 ntBASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 AC009314.1-201ENST00000603871 304 ntBASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEDD1Q8NHV4 LINC01109-201ENST00000603837 3081 ntBASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 RNU6-312P-201ENST00000364629 107 ntBASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 Y_RNA.262-201ENST00000364641 102 ntBASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 RNA5SP479-201ENST00000364858 117 ntBASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 AC019155.1-201ENST00000382242 574 ntBASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 RNU6-1056P-201ENST00000383996 107 ntBASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 Y_RNA.412-201ENST00000384001 104 ntBASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 AL356095.1-201ENST00000417217 199 ntBASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 RPS20P1-201ENST00000434853 354 ntBASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 AC009237.7-201ENST00000447357 229 ntBASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 RPS4XP22-201ENST00000480755 780 ntBASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 AL160314.1-201ENST00000490836 438 ntBASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 HMGN1P11-201ENST00000508668 303 ntBASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.95□□□□□ -1.62
NEDD1Q8NHV4 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms