Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 SNORD114-1-201ENST00000362705 72 ntBASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 SNORD116-12-201ENST00000384468 92 ntBASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 RNU6-14P-201ENST00000384630 106 ntBASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 MIR934-201ENST00000401241 83 ntBASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 MIR320C1-201ENST00000408566 88 ntBASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 RNU4-26P-201ENST00000410270 107 ntBASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 RPS20P15-201ENST00000412792 311 ntBASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 OR51A5P-201ENST00000415429 942 ntBASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 RPL21P99-201ENST00000480369 423 ntBASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 AC018868.1-201ENST00000491307 315 ntBASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 AC104629.1-201ENST00000494226 508 ntBASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 RPL23AP63-201ENST00000498752 471 ntBASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 RNU6-276P-201ENST00000516114 96 ntBASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 RPS3AP4-201ENST00000555161 764 ntBASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 DEFB122-202ENST00000569013 197 ntBASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 MIR3618-201ENST00000580330 88 ntBASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.67□□□□□ -2.14
CLHC1Q8NHS4 SNORA40.18-201ENST00000391200 128 ntBASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 MIR1294-201ENST00000408503 142 ntBASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 AC083875.1-201ENST00000419509 405 ntBASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 PGBD4P6-201ENST00000421501 610 ntBASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 TXNL1P1-201ENST00000429528 554 ntBASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 FTH1P25-201ENST00000447665 469 ntBASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 AC104685.1-201ENST00000502445 371 ntBASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 SNORA19.3-201ENST00000516165 130 ntBASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 RNU6-970P-201ENST00000516312 107 ntBASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 AC091163.3-201ENST00000518269 1144 ntBASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 AP006587.4-201ENST00000526053 529 ntBASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 AC022254.1-201ENST00000567857 235 ntBASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 AL713866.2-201ENST00000603579 219 ntBASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 AC087045.1-201ENST00000605856 382 ntBASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 RNU6-91P-201ENST00000607774 107 ntBASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 AC108479.2-201ENST00000617314 601 ntBASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.66□□□□□ -2.14
CLHC1Q8NHS4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.14
CLHC1Q8NHS4 AP000776.1-201ENST00000530032 1663 ntBASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 TEX21P-201ENST00000447107 1476 ntBASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 MIR126-201ENST00000362291 85 ntBASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 Y_RNA.192-201ENST00000363977 102 ntBASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 RNA5SP363-201ENST00000365072 115 ntBASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 AL591034.2-201ENST00000402839 359 ntBASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 AL136310.1-201ENST00000404926 654 ntBASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 MIR1305-201ENST00000408300 86 ntBASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 MTATP6P20-201ENST00000414147 562 ntBASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 EIF4EP2-201ENST00000422816 654 ntBASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 AL445669.1-201ENST00000426743 755 ntBASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 USP9YP24-201ENST00000434374 697 ntBASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 IFNA20P-201ENST00000436840 528 ntBASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 RNA5SP57-201ENST00000459463 123 ntBASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 AC011005.2-201ENST00000487324 359 ntBASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 AC117522.2-201ENST00000510049 657 ntBASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 AC104581.2-201ENST00000572227 430 ntBASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 MIR3198-2-201ENST00000577868 80 ntBASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 AC103810.8-201ENST00000607347 118 ntBASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 AC092192.1-201ENST00000633154 1018 ntBASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.65□□□□□ -2.15
CLHC1Q8NHS4 RNU5E-10P-201ENST00000363506 118 ntBASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 RNU6-997P-201ENST00000384725 107 ntBASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 HMGB1P27-201ENST00000431429 603 ntBASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 AP000949.1-201ENST00000438328 629 ntBASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 AC068587.2-201ENST00000478386 781 ntBASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 RPL7P43-201ENST00000478876 753 ntBASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 RPL7P18-201ENST00000478965 734 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms