Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.34□□□□□ -2.35
SYNE1Q8NF91 RNU6-217P-201ENST00000384164 104 ntBASIC0.34□□□□□ -2.35
SYNE1Q8NF91 MIR29B2-201ENST00000385055 81 ntBASIC0.34□□□□□ -2.35
SYNE1Q8NF91 MORN2-203ENST00000409131 544 ntTSL 5 BASIC0.34□□□□□ -2.35
SYNE1Q8NF91 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.34□□□□□ -2.35
SYNE1Q8NF91 USP9YP22-201ENST00000438971 294 ntBASIC0.34□□□□□ -2.35
SYNE1Q8NF91 AC118273.2-201ENST00000532092 465 ntBASIC0.34□□□□□ -2.35
SYNE1Q8NF91 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.34□□□□□ -2.35
SYNE1Q8NF91 AC087465.1-201ENST00000560574 245 ntBASIC0.34□□□□□ -2.35
SYNE1Q8NF91 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.34□□□□□ -2.35
SYNE1Q8NF91 AC004853.1-201ENST00000604902 698 ntBASIC0.34□□□□□ -2.35
SYNE1Q8NF91 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.34□□□□□ -2.35
SYNE1Q8NF91 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
SYNE1Q8NF91 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.34□□□□□ -2.35
SYNE1Q8NF91 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.34□□□□□ -2.35
SYNE1Q8NF91 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.34□□□□□ -2.35
SYNE1Q8NF91 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.34□□□□□ -2.35
SYNE1Q8NF91 MIR4765-201ENST00000585007 77 ntBASIC0.34□□□□□ -2.35
SYNE1Q8NF91 AP000776.1-201ENST00000530032 1663 ntBASIC0.34□□□□□ -2.35
SYNE1Q8NF91 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
SYNE1Q8NF91 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.34□□□□□ -2.35
SYNE1Q8NF91 TXNP7-201ENST00000406296 293 ntBASIC0.34□□□□□ -2.35
SYNE1Q8NF91 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.34□□□□□ -2.35
SYNE1Q8NF91 MTCO2P5-201ENST00000422621 426 ntBASIC0.34□□□□□ -2.35
SYNE1Q8NF91 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.34□□□□□ -2.35
SYNE1Q8NF91 AL161651.1-201ENST00000440882 223 ntBASIC0.34□□□□□ -2.35
SYNE1Q8NF91 RNU11-2P-201ENST00000516898 142 ntBASIC0.34□□□□□ -2.35
SYNE1Q8NF91 AC118942.1-201ENST00000529674 1035 ntBASIC0.34□□□□□ -2.35
SYNE1Q8NF91 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC0.34□□□□□ -2.35
SYNE1Q8NF91 AC104820.1-201ENST00000624183 307 ntBASIC0.34□□□□□ -2.35
SYNE1Q8NF91 AC087821.2-201ENST00000637086 450 ntBASIC0.34□□□□□ -2.35
SYNE1Q8NF91 ENSAP3-201ENST00000312710 333 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 RNU6-223P-201ENST00000362830 107 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 AL356421.1-201ENST00000403255 413 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 AL356432.1-201ENST00000405809 419 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 AP003476.1-201ENST00000623984 516 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 RNU6-878P-201ENST00000384578 110 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 MIR135A2-201ENST00000384854 100 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 AC074117.2-201ENST00000417130 397 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.34□□□□□ -2.36
SYNE1Q8NF91 CBX3P6-201ENST00000430257 527 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 AC002381.1-201ENST00000447049 280 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.34□□□□□ -2.36
SYNE1Q8NF91 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC0.34□□□□□ -2.36
SYNE1Q8NF91 TPT1P8-201ENST00000510120 555 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.34□□□□□ -2.36
SYNE1Q8NF91 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.34□□□□□ -2.36
SYNE1Q8NF91 AC090502.2-201ENST00000549267 280 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 AC090888.1-201ENST00000561335 1141 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 AC004009.2-201ENST00000623016 728 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 RNU4-78P-201ENST00000410940 126 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.34□□□□□ -2.36
SYNE1Q8NF91 RNFT1P2-201ENST00000443064 757 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 snoU109.1-201ENST00000459339 135 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.34□□□□□ -2.36
SYNE1Q8NF91 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC0.34□□□□□ -2.36
SYNE1Q8NF91 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.34□□□□□ -2.36
SYNE1Q8NF91 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.34□□□□□ -2.36
SYNE1Q8NF91 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
SYNE1Q8NF91 RNU6-1284P-201ENST00000363701 100 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 RNU6-796P-201ENST00000391086 107 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 MTCYBP38-201ENST00000417160 1123 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 MRPS36P1-201ENST00000421291 307 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 PSMA6P3-201ENST00000428242 164 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 GTF2IP3-201ENST00000433887 494 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 MTCO1P44-201ENST00000441935 243 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.34□□□□□ -2.36
SYNE1Q8NF91 AC079448.1-201ENST00000449377 373 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 AC092757.1-201ENST00000467293 467 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 PABPC1P3-201ENST00000469174 459 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 MTCO1P31-201ENST00000506355 492 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 AC006518.2-201ENST00000542513 940 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.34□□□□□ -2.36
SYNE1Q8NF91 VN1R87P-201ENST00000596706 487 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 AC109809.1-201ENST00000619665 545 ntBASIC0.34□□□□□ -2.36
SYNE1Q8NF91 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.34□□□□□ -2.36
SYNE1Q8NF91 RNU6-637P-201ENST00000384050 107 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 MIR95-201ENST00000385072 81 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 SNORD65.1-201ENST00000390889 71 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 OR51A5P-201ENST00000415429 942 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 SNRPEP7-201ENST00000438350 220 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AC010468.3-201ENST00000508225 458 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AL671309.1-201ENST00000603750 544 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 SNRPGP17-201ENST00000603780 214 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AL031775.1-201ENST00000607014 887 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 MIR3529-201ENST00000637713 78 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 CDR1-202ENST00000625883 1485 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AC138393.1-203ENST00000327086 343 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 RNU6-611P-201ENST00000384276 104 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 MIR532-201ENST00000385025 91 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 CYCSP33-201ENST00000414485 327 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 PPP1R11P2-201ENST00000423543 382 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms