Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 MIR5690-201ENST00000583739 73 ntBASIC3.98□□□□□ -1.77
SYNPOQ8N3V7 AC044792.1-201ENST00000593294 196 ntBASIC3.98□□□□□ -1.77
SYNPOQ8N3V7 AP000787.2-201ENST00000604432 568 ntBASIC3.98□□□□□ -1.77
SYNPOQ8N3V7 U3.45-201ENST00000607547 219 ntBASIC3.98□□□□□ -1.77
SYNPOQ8N3V7 AL133215.3-201ENST00000609801 448 ntBASIC3.98□□□□□ -1.77
SYNPOQ8N3V7 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.98□□□□□ -1.77
SYNPOQ8N3V7 AL160413.1-201ENST00000622780 310 ntBASIC3.98□□□□□ -1.77
SYNPOQ8N3V7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SYNPOQ8N3V7 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SYNPOQ8N3V7 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
SYNPOQ8N3V7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SYNPOQ8N3V7 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SYNPOQ8N3V7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
SYNPOQ8N3V7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
SYNPOQ8N3V7 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.98□□□□□ -1.77
SYNPOQ8N3V7 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 RNU6-78P-201ENST00000362897 107 ntBASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 RNU6-428P-201ENST00000362942 107 ntBASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 MIR183-201ENST00000384958 110 ntBASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 RNU6-325P-201ENST00000411132 105 ntBASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 RPS29P4-201ENST00000414733 161 ntBASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 BPY2DP-201ENST00000422208 265 ntBASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 HIGD1AP11-201ENST00000438361 280 ntBASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 AC006026.2-201ENST00000457376 180 ntBASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 AC106707.2-201ENST00000484182 374 ntBASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 Y_RNA.718-201ENST00000517110 102 ntBASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 AC109479.2-201ENST00000517842 174 ntBASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 AC009314.1-201ENST00000603871 304 ntBASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 AC124303.1-201ENST00000605703 360 ntBASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 PLCE1P1-201ENST00000622094 305 ntBASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 MIR4727-201ENST00000622232 55 ntBASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 AC091953.5-201ENST00000622919 233 ntBASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 AC110491.1-201ENST00000562191 2010 ntBASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 ZNF962P-201ENST00000443465 3140 ntBASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SYNPOQ8N3V7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SYNPOQ8N3V7 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
SYNPOQ8N3V7 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.96□□□□□ -1.77
SYNPOQ8N3V7 RPL9P7-201ENST00000330965 580 ntBASIC3.96□□□□□ -1.78
SYNPOQ8N3V7 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SYNPOQ8N3V7 MIR491-201ENST00000384877 84 ntBASIC3.96□□□□□ -1.78
SYNPOQ8N3V7 RNY4P36-201ENST00000391116 96 ntBASIC3.96□□□□□ -1.78
SYNPOQ8N3V7 AL030996.1-201ENST00000411430 235 ntBASIC3.96□□□□□ -1.78
SYNPOQ8N3V7 AL035423.1-201ENST00000420331 213 ntBASIC3.96□□□□□ -1.78
SYNPOQ8N3V7 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.96□□□□□ -1.78
SYNPOQ8N3V7 HMGN2P20-201ENST00000437531 273 ntBASIC3.96□□□□□ -1.78
SYNPOQ8N3V7 AL513043.1-201ENST00000439124 535 ntBASIC3.96□□□□□ -1.78
SYNPOQ8N3V7 Y_RNA.653-201ENST00000459091 95 ntBASIC3.96□□□□□ -1.78
SYNPOQ8N3V7 RPL9P9-202ENST00000466501 579 ntBASIC3.96□□□□□ -1.78
SYNPOQ8N3V7 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.96□□□□□ -1.78
SYNPOQ8N3V7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.96□□□□□ -1.78
SYNPOQ8N3V7 SNORA70.24-201ENST00000517233 118 ntBASIC3.96□□□□□ -1.78
SYNPOQ8N3V7 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.96□□□□□ -1.78
SYNPOQ8N3V7 TRAV32-201ENST00000553993 340 ntBASIC3.96□□□□□ -1.78
SYNPOQ8N3V7 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.96□□□□□ -1.78
SYNPOQ8N3V7 AC009229.3-201ENST00000608056 282 ntBASIC3.96□□□□□ -1.78
SYNPOQ8N3V7 AC097372.5-201ENST00000623665 376 ntBASIC3.96□□□□□ -1.78
SYNPOQ8N3V7 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.96□□□□□ -1.78
SYNPOQ8N3V7 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.96□□□□□ -1.78
SYNPOQ8N3V7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.78
SYNPOQ8N3V7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SYNPOQ8N3V7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
SYNPOQ8N3V7 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
SYNPOQ8N3V7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.95□□□□□ -1.78
SYNPOQ8N3V7 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SYNPOQ8N3V7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SYNPOQ8N3V7 Y_RNA.2-201ENST00000362330 96 ntBASIC3.95□□□□□ -1.78
SYNPOQ8N3V7 RNU6-1317P-201ENST00000364582 104 ntBASIC3.95□□□□□ -1.78
SYNPOQ8N3V7 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SYNPOQ8N3V7 MIR518D-201ENST00000385014 87 ntBASIC3.95□□□□□ -1.78
SYNPOQ8N3V7 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SYNPOQ8N3V7 Y_RNA.579-201ENST00000390939 94 ntBASIC3.95□□□□□ -1.78
SYNPOQ8N3V7 SNORA75.4-201ENST00000391278 119 ntBASIC3.95□□□□□ -1.78
SYNPOQ8N3V7 SNORA3C-201ENST00000408792 125 ntBASIC3.95□□□□□ -1.78
SYNPOQ8N3V7 RNU6-1050P-201ENST00000410388 107 ntBASIC3.95□□□□□ -1.78
SYNPOQ8N3V7 RNU2-49P-201ENST00000410666 184 ntBASIC3.95□□□□□ -1.78
SYNPOQ8N3V7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.95□□□□□ -1.78
SYNPOQ8N3V7 RPS15AP5-201ENST00000436276 388 ntBASIC3.95□□□□□ -1.78
SYNPOQ8N3V7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.95□□□□□ -1.78
SYNPOQ8N3V7 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.95□□□□□ -1.78
SYNPOQ8N3V7 RPL23AP14-201ENST00000468281 468 ntBASIC3.95□□□□□ -1.78
SYNPOQ8N3V7 AP002884.2-201ENST00000471647 395 ntBASIC3.95□□□□□ -1.78
SYNPOQ8N3V7 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.95□□□□□ -1.78
SYNPOQ8N3V7 RN7SKP18-201ENST00000516005 275 ntBASIC3.95□□□□□ -1.78
SYNPOQ8N3V7 SCARNA14-201ENST00000516903 136 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms