Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.96□□□□□ -1.78
SYNE4Q8N205 Y_RNA.653-201ENST00000459091 95 ntBASIC3.96□□□□□ -1.78
SYNE4Q8N205 SNORD108-201ENST00000459332 71 ntBASIC3.96□□□□□ -1.78
SYNE4Q8N205 CENPBD1P1-201ENST00000464061 469 ntBASIC3.96□□□□□ -1.78
SYNE4Q8N205 HMGB1P30-201ENST00000492455 606 ntBASIC3.96□□□□□ -1.78
SYNE4Q8N205 AC108078.2-201ENST00000510750 236 ntBASIC3.96□□□□□ -1.78
SYNE4Q8N205 TBCAP3-201ENST00000512475 312 ntBASIC3.96□□□□□ -1.78
SYNE4Q8N205 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.96□□□□□ -1.78
SYNE4Q8N205 AC009812.2-201ENST00000517657 457 ntBASIC3.96□□□□□ -1.78
SYNE4Q8N205 AC103783.1-201ENST00000520506 373 ntBASIC3.96□□□□□ -1.78
SYNE4Q8N205 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.96□□□□□ -1.78
SYNE4Q8N205 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.96□□□□□ -1.78
SYNE4Q8N205 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.96□□□□□ -1.78
SYNE4Q8N205 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.96□□□□□ -1.78
SYNE4Q8N205 AC023043.2-201ENST00000589678 1026 ntBASIC3.96□□□□□ -1.78
SYNE4Q8N205 AC104763.2-201ENST00000604179 382 ntBASIC3.96□□□□□ -1.78
SYNE4Q8N205 ATP1B3P1-201ENST00000605365 821 ntBASIC3.96□□□□□ -1.78
SYNE4Q8N205 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SYNE4Q8N205 API5P2-201ENST00000397055 1498 ntBASIC3.96□□□□□ -1.78
SYNE4Q8N205 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SYNE4Q8N205 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
SYNE4Q8N205 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
SYNE4Q8N205 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SYNE4Q8N205 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.95□□□□□ -1.78
SYNE4Q8N205 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.95□□□□□ -1.78
SYNE4Q8N205 SMIM11P1-201ENST00000369586 178 ntBASIC3.95□□□□□ -1.78
SYNE4Q8N205 RNU6-637P-201ENST00000384050 107 ntBASIC3.95□□□□□ -1.78
SYNE4Q8N205 CISD1P1-201ENST00000393907 327 ntBASIC3.95□□□□□ -1.78
SYNE4Q8N205 AL139397.2-201ENST00000404529 772 ntBASIC3.95□□□□□ -1.78
SYNE4Q8N205 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.95□□□□□ -1.78
SYNE4Q8N205 ARL5AP1-201ENST00000418991 388 ntBASIC3.95□□□□□ -1.78
SYNE4Q8N205 AL137014.1-201ENST00000420490 1226 ntBASIC3.95□□□□□ -1.78
SYNE4Q8N205 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.95□□□□□ -1.78
SYNE4Q8N205 MTCYBP9-201ENST00000431021 303 ntBASIC3.95□□□□□ -1.78
SYNE4Q8N205 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.95□□□□□ -1.78
SYNE4Q8N205 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.95□□□□□ -1.78
SYNE4Q8N205 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.95□□□□□ -1.78
SYNE4Q8N205 SCARNA18-201ENST00000459004 134 ntBASIC3.95□□□□□ -1.78
SYNE4Q8N205 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
SYNE4Q8N205 RNU6-1092P-201ENST00000516955 87 ntBASIC3.95□□□□□ -1.78
SYNE4Q8N205 DEFB108D-201ENST00000527787 222 ntBASIC3.95□□□□□ -1.78
SYNE4Q8N205 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.95□□□□□ -1.78
SYNE4Q8N205 RPL23AP84-201ENST00000571193 464 ntBASIC3.95□□□□□ -1.78
SYNE4Q8N205 AC008521.1-201ENST00000587471 187 ntBASIC3.95□□□□□ -1.78
SYNE4Q8N205 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.95□□□□□ -1.78
SYNE4Q8N205 AL355598.1-201ENST00000604169 202 ntBASIC3.95□□□□□ -1.78
SYNE4Q8N205 AC012409.4-201ENST00000612923 249 ntBASIC3.95□□□□□ -1.78
SYNE4Q8N205 AC098657.3-201ENST00000620434 263 ntBASIC3.95□□□□□ -1.78
SYNE4Q8N205 AL353748.2-201ENST00000622148 471 ntBASIC3.95□□□□□ -1.78
SYNE4Q8N205 AL669831.3-213ENST00000636676 183 ntBASIC3.95□□□□□ -1.78
SYNE4Q8N205 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
SYNE4Q8N205 MTND5P30-201ENST00000452896 1731 ntBASIC3.95□□□□□ -1.78
SYNE4Q8N205 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SYNE4Q8N205 TPTE2P4-201ENST00000258589 1605 ntBASIC3.95□□□□□ -1.78
SYNE4Q8N205 ZNF519P1-201ENST00000449011 1626 ntBASIC3.95□□□□□ -1.78
SYNE4Q8N205 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.95□□□□□ -1.78
SYNE4Q8N205 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SYNE4Q8N205 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
SYNE4Q8N205 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SYNE4Q8N205 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SYNE4Q8N205 AC017071.1-201ENST00000564407 2204 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.94□□□□□ -1.78
SYNE4Q8N205 RNU6-1287P-201ENST00000362914 107 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 Y_RNA.135-201ENST00000363439 95 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SYNE4Q8N205 SNORD116-11-201ENST00000383882 92 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 RNU6-601P-201ENST00000384540 107 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 RNU6-1060P-201ENST00000384664 107 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 SNORD67-201ENST00000390833 111 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 RNA5SP219-201ENST00000390940 113 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 RNU6-954P-201ENST00000411355 107 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 BX682237.1-201ENST00000415016 335 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 RAC1P3-201ENST00000416129 580 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 MCFD2P1-201ENST00000417812 300 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.94□□□□□ -1.78
SYNE4Q8N205 AL590632.1-201ENST00000424289 371 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 SNRPEP4-201ENST00000435815 279 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 AC234775.1-201ENST00000454247 670 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 RPL23AP67-201ENST00000465341 474 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 RN7SL432P-201ENST00000484057 298 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 VN1R104P-201ENST00000505115 1009 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.94□□□□□ -1.78
SYNE4Q8N205 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.94□□□□□ -1.78
SYNE4Q8N205 RNU6-988P-201ENST00000519081 107 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.94□□□□□ -1.78
SYNE4Q8N205 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.94□□□□□ -1.78
SYNE4Q8N205 MIR3149-201ENST00000584629 83 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.94□□□□□ -1.78
SYNE4Q8N205 AL138726.1-201ENST00000614873 333 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 uc_338.11-201ENST00000619132 160 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 AC244205.2-202ENST00000635781 342 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 AC008725.1-201ENST00000605123 2263 ntBASIC3.94□□□□□ -1.78
SYNE4Q8N205 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SYNE4Q8N205 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.94□□□□□ -1.78
SYNE4Q8N205 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SYNE4Q8N205 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
SYNE4Q8N205 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
SYNE4Q8N205 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 158.2 ms