Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
VRK3Q8IV63 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
VRK3Q8IV63 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VRK3Q8IV63 AC007685.1-201ENST00000329806 452 ntBASIC3.58□□□□□ -1.84
VRK3Q8IV63 Y_RNA.222-201ENST00000364264 102 ntBASIC3.58□□□□□ -1.84
VRK3Q8IV63 Y_RNA.350-201ENST00000365409 98 ntBASIC3.58□□□□□ -1.84
VRK3Q8IV63 RNU6-209P-201ENST00000384118 107 ntBASIC3.58□□□□□ -1.84
VRK3Q8IV63 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
VRK3Q8IV63 Z98941.1-201ENST00000407764 100 ntBASIC3.58□□□□□ -1.84
VRK3Q8IV63 RN7SKP202-201ENST00000410439 330 ntBASIC3.58□□□□□ -1.84
VRK3Q8IV63 RPL17P36-201ENST00000420302 549 ntBASIC3.58□□□□□ -1.84
VRK3Q8IV63 ELOCP20-201ENST00000422460 345 ntBASIC3.58□□□□□ -1.84
VRK3Q8IV63 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.58□□□□□ -1.84
VRK3Q8IV63 AL359073.1-201ENST00000448036 403 ntBASIC3.58□□□□□ -1.84
VRK3Q8IV63 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.58□□□□□ -1.84
VRK3Q8IV63 PCMTD1P1-201ENST00000455560 355 ntBASIC3.58□□□□□ -1.84
VRK3Q8IV63 AP000926.1-201ENST00000479573 241 ntBASIC3.58□□□□□ -1.84
VRK3Q8IV63 AC105758.1-201ENST00000506038 399 ntBASIC3.58□□□□□ -1.84
VRK3Q8IV63 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
VRK3Q8IV63 AC069113.1-201ENST00000517763 267 ntBASIC3.58□□□□□ -1.84
VRK3Q8IV63 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.58□□□□□ -1.84
VRK3Q8IV63 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.58□□□□□ -1.84
VRK3Q8IV63 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.58□□□□□ -1.84
VRK3Q8IV63 AC040926.1-201ENST00000530195 238 ntBASIC3.58□□□□□ -1.84
VRK3Q8IV63 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.58□□□□□ -1.84
VRK3Q8IV63 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.58□□□□□ -1.84
VRK3Q8IV63 AC015967.1-201ENST00000619893 476 ntBASIC3.58□□□□□ -1.84
VRK3Q8IV63 AC039056.2-201ENST00000622261 511 ntBASIC3.58□□□□□ -1.84
VRK3Q8IV63 AC138627.2-201ENST00000624202 601 ntBASIC3.58□□□□□ -1.84
VRK3Q8IV63 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.58□□□□□ -1.84
VRK3Q8IV63 AC106871.1-201ENST00000568324 3102 ntBASIC3.58□□□□□ -1.84
VRK3Q8IV63 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
VRK3Q8IV63 AC010615.1-201ENST00000594254 1764 ntBASIC3.58□□□□□ -1.84
VRK3Q8IV63 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VRK3Q8IV63 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VRK3Q8IV63 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VRK3Q8IV63 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
VRK3Q8IV63 Y_RNA.314-201ENST00000365114 102 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 RNU6-1062P-201ENST00000383908 107 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 Y_RNA.461-201ENST00000384263 103 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 Y_RNA.551-201ENST00000384661 102 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 MIR1250-201ENST00000408098 113 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 RNU6-1156P-201ENST00000410365 100 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 RNU4-61P-201ENST00000411243 107 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 RNU6-607P-201ENST00000411283 108 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 RAB9AP3-201ENST00000412737 573 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.57□□□□□ -1.84
VRK3Q8IV63 AL035423.1-201ENST00000420331 213 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.57□□□□□ -1.84
VRK3Q8IV63 UBE2D3P2-201ENST00000424409 445 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 AL138785.1-201ENST00000425821 331 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.57□□□□□ -1.84
VRK3Q8IV63 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.57□□□□□ -1.84
VRK3Q8IV63 AL360271.2-201ENST00000447710 161 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 FCF1P4-201ENST00000448326 183 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 RAB9AP1-201ENST00000449393 573 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.57□□□□□ -1.84
VRK3Q8IV63 RPL23AP31-201ENST00000456160 467 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 RN7SKP234-201ENST00000517173 224 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 SNORA31.22-201ENST00000517204 135 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.57□□□□□ -1.84
VRK3Q8IV63 AC023632.4-201ENST00000517783 191 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.57□□□□□ -1.84
VRK3Q8IV63 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.57□□□□□ -1.84
VRK3Q8IV63 AP000889.1-201ENST00000530968 660 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.57□□□□□ -1.84
VRK3Q8IV63 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.57□□□□□ -1.84
VRK3Q8IV63 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.57□□□□□ -1.84
VRK3Q8IV63 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.57□□□□□ -1.84
VRK3Q8IV63 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.57□□□□□ -1.84
VRK3Q8IV63 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.57□□□□□ -1.84
VRK3Q8IV63 LRRC37A5P-203ENST00000580181 585 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 AC067852.4-201ENST00000590314 478 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 KLKP1-201ENST00000595979 403 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.57□□□□□ -1.84
VRK3Q8IV63 AC005183.1-201ENST00000603687 1979 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.57□□□□□ -1.84
VRK3Q8IV63 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 SDR42E1P2-201ENST00000614861 481 ntBASIC3.57□□□□□ -1.84
VRK3Q8IV63 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
VRK3Q8IV63 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VRK3Q8IV63 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VRK3Q8IV63 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VRK3Q8IV63 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.57□□□□□ -1.84
VRK3Q8IV63 PRO1804-201ENST00000623780 2050 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VRK3Q8IV63 ZNF285B-201ENST00000561698 1767 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 AC022893.2-201ENST00000564832 3296 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
VRK3Q8IV63 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.56□□□□□ -1.84
VRK3Q8IV63 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VRK3Q8IV63 Y_RNA.376-201ENST00000365638 108 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 Y_RNA.534-201ENST00000384599 112 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 RNU6-713P-201ENST00000384761 107 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 RPL21P17-201ENST00000397467 475 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 MIR1302-6-201ENST00000408466 90 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 RNU2-43P-201ENST00000410306 190 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 AL030996.1-201ENST00000411430 235 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 RPL21P90-201ENST00000415692 466 ntBASIC3.56□□□□□ -1.84
VRK3Q8IV63 BX842559.1-201ENST00000419615 532 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 181.8 ms