Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 Y_RNA.555-201ENST00000384673 110 ntBASIC5.66□□□□□ -1.5
PPARGC1BQ86YN6 MIR554-201ENST00000384874 96 ntBASIC5.66□□□□□ -1.5
PPARGC1BQ86YN6 RPL21P17-201ENST00000397467 475 ntBASIC5.66□□□□□ -1.5
PPARGC1BQ86YN6 AL445529.1-201ENST00000398713 389 ntBASIC5.66□□□□□ -1.5
PPARGC1BQ86YN6 AL137014.1-201ENST00000420490 1226 ntBASIC5.66□□□□□ -1.5
PPARGC1BQ86YN6 BX276092.3-201ENST00000424182 230 ntBASIC5.66□□□□□ -1.5
PPARGC1BQ86YN6 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.66□□□□□ -1.5
PPARGC1BQ86YN6 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.66□□□□□ -1.5
PPARGC1BQ86YN6 AL392103.1-201ENST00000447000 198 ntBASIC5.66□□□□□ -1.5
PPARGC1BQ86YN6 RNU7-170P-201ENST00000459303 61 ntBASIC5.66□□□□□ -1.5
PPARGC1BQ86YN6 AC010631.1-201ENST00000474150 156 ntBASIC5.66□□□□□ -1.5
PPARGC1BQ86YN6 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5.66□□□□□ -1.5
PPARGC1BQ86YN6 RNU6-111P-201ENST00000517179 105 ntBASIC5.66□□□□□ -1.5
PPARGC1BQ86YN6 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.66□□□□□ -1.5
PPARGC1BQ86YN6 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.66□□□□□ -1.5
PPARGC1BQ86YN6 AC007566.2-201ENST00000603642 413 ntBASIC5.66□□□□□ -1.5
PPARGC1BQ86YN6 RAC1P9-201ENST00000604990 392 ntBASIC5.66□□□□□ -1.5
PPARGC1BQ86YN6 SDR42E1P2-201ENST00000614861 481 ntBASIC5.66□□□□□ -1.5
PPARGC1BQ86YN6 SDR42E1P4-201ENST00000620894 481 ntBASIC5.66□□□□□ -1.5
PPARGC1BQ86YN6 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PPARGC1BQ86YN6 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
PPARGC1BQ86YN6 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PPARGC1BQ86YN6 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PPARGC1BQ86YN6 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PPARGC1BQ86YN6 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PPARGC1BQ86YN6 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.65□□□□□ -1.5
PPARGC1BQ86YN6 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PPARGC1BQ86YN6 RNU6-806P-201ENST00000365147 105 ntBASIC5.65□□□□□ -1.5
PPARGC1BQ86YN6 SNORA5A-201ENST00000384111 134 ntBASIC5.65□□□□□ -1.5
PPARGC1BQ86YN6 RNU6-190P-201ENST00000384154 102 ntBASIC5.65□□□□□ -1.5
PPARGC1BQ86YN6 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PPARGC1BQ86YN6 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PPARGC1BQ86YN6 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.65□□□□□ -1.5
PPARGC1BQ86YN6 RPS15AP40-201ENST00000419621 391 ntBASIC5.65□□□□□ -1.5
PPARGC1BQ86YN6 AC091286.1-201ENST00000431233 461 ntBASIC5.65□□□□□ -1.5
PPARGC1BQ86YN6 AL353997.1-201ENST00000432936 108 ntBASIC5.65□□□□□ -1.5
PPARGC1BQ86YN6 GAPDHP27-201ENST00000447427 1020 ntBASIC5.65□□□□□ -1.5
PPARGC1BQ86YN6 OR2AQ1P-201ENST00000451972 200 ntBASIC5.65□□□□□ -1.5
PPARGC1BQ86YN6 AC007967.1-201ENST00000455422 1159 ntBASIC5.65□□□□□ -1.5
PPARGC1BQ86YN6 PCMTD1P1-201ENST00000455560 355 ntBASIC5.65□□□□□ -1.5
PPARGC1BQ86YN6 RPL23AP31-201ENST00000456160 467 ntBASIC5.65□□□□□ -1.5
PPARGC1BQ86YN6 AC018437.1-201ENST00000492214 406 ntBASIC5.65□□□□□ -1.5
PPARGC1BQ86YN6 AC006600.1-201ENST00000572529 153 ntBASIC5.65□□□□□ -1.5
PPARGC1BQ86YN6 AC174048.1-201ENST00000603389 144 ntBASIC5.65□□□□□ -1.5
PPARGC1BQ86YN6 BMS1P21-201ENST00000634565 365 ntBASIC5.65□□□□□ -1.5
PPARGC1BQ86YN6 DDX10P1-201ENST00000448545 1933 ntBASIC5.65□□□□□ -1.51
PPARGC1BQ86YN6 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PPARGC1BQ86YN6 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PPARGC1BQ86YN6 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PPARGC1BQ86YN6 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PPARGC1BQ86YN6 PRO1804-201ENST00000623780 2050 ntBASIC5.64□□□□□ -1.51
PPARGC1BQ86YN6 Y_RNA.785-201ENST00000384290 109 ntBASIC5.64□□□□□ -1.51
PPARGC1BQ86YN6 AL138885.1-201ENST00000405921 675 ntBASIC5.64□□□□□ -1.51
PPARGC1BQ86YN6 RPL31P2-201ENST00000413849 377 ntBASIC5.64□□□□□ -1.51
PPARGC1BQ86YN6 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.64□□□□□ -1.51
PPARGC1BQ86YN6 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.64□□□□□ -1.51
PPARGC1BQ86YN6 AL162389.1-201ENST00000449233 177 ntBASIC5.64□□□□□ -1.51
PPARGC1BQ86YN6 PRELID3BP1-201ENST00000457142 540 ntBASIC5.64□□□□□ -1.51
PPARGC1BQ86YN6 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.64□□□□□ -1.51
PPARGC1BQ86YN6 RNU7-138P-201ENST00000459479 64 ntBASIC5.64□□□□□ -1.51
PPARGC1BQ86YN6 AC087385.1-201ENST00000475062 312 ntBASIC5.64□□□□□ -1.51
PPARGC1BQ86YN6 MTCO3P44-201ENST00000510977 541 ntBASIC5.64□□□□□ -1.51
PPARGC1BQ86YN6 RNU7-4P-201ENST00000516961 62 ntBASIC5.64□□□□□ -1.51
PPARGC1BQ86YN6 RNU6-570P-201ENST00000517051 105 ntBASIC5.64□□□□□ -1.51
PPARGC1BQ86YN6 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.64□□□□□ -1.51
PPARGC1BQ86YN6 AC012119.1-201ENST00000603184 222 ntBASIC5.64□□□□□ -1.51
PPARGC1BQ86YN6 AC006077.1-201ENST00000604746 343 ntBASIC5.64□□□□□ -1.51
PPARGC1BQ86YN6 ELOCP5-201ENST00000604924 333 ntBASIC5.64□□□□□ -1.51
PPARGC1BQ86YN6 AC002044.1-201ENST00000606707 158 ntBASIC5.64□□□□□ -1.51
PPARGC1BQ86YN6 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC5.64□□□□□ -1.51
PPARGC1BQ86YN6 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PPARGC1BQ86YN6 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC5.63□□□□□ -1.51
PPARGC1BQ86YN6 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
PPARGC1BQ86YN6 RNU6-45P-201ENST00000384471 107 ntBASIC5.63□□□□□ -1.51
PPARGC1BQ86YN6 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.63□□□□□ -1.51
PPARGC1BQ86YN6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.63□□□□□ -1.51
PPARGC1BQ86YN6 SNORA67.7-201ENST00000516664 135 ntBASIC5.63□□□□□ -1.51
PPARGC1BQ86YN6 AC022790.1-201ENST00000522872 204 ntBASIC5.63□□□□□ -1.51
PPARGC1BQ86YN6 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.63□□□□□ -1.51
PPARGC1BQ86YN6 AC011602.1-201ENST00000546484 331 ntBASIC5.63□□□□□ -1.51
PPARGC1BQ86YN6 CR383656.7-201ENST00000548164 174 ntBASIC5.63□□□□□ -1.51
PPARGC1BQ86YN6 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.63□□□□□ -1.51
PPARGC1BQ86YN6 AC093227.2-201ENST00000589357 285 ntBASIC5.63□□□□□ -1.51
PPARGC1BQ86YN6 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.63□□□□□ -1.51
PPARGC1BQ86YN6 AL031176.1-201ENST00000604554 466 ntBASIC5.63□□□□□ -1.51
PPARGC1BQ86YN6 RNVU1-4-201ENST00000612985 164 ntBASIC5.63□□□□□ -1.51
PPARGC1BQ86YN6 AL034408.1-202ENST00000636088 415 ntBASIC5.63□□□□□ -1.51
PPARGC1BQ86YN6 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PPARGC1BQ86YN6 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC5.63□□□□□ -1.51
PPARGC1BQ86YN6 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PPARGC1BQ86YN6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PPARGC1BQ86YN6 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.62□□□□□ -1.51
PPARGC1BQ86YN6 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
PPARGC1BQ86YN6 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PPARGC1BQ86YN6 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.62□□□□□ -1.51
PPARGC1BQ86YN6 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PPARGC1BQ86YN6 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PPARGC1BQ86YN6 RNY3P11-201ENST00000364153 102 ntBASIC5.62□□□□□ -1.51
PPARGC1BQ86YN6 RNU4-50P-201ENST00000364361 141 ntBASIC5.62□□□□□ -1.51
PPARGC1BQ86YN6 RNU6-1329P-201ENST00000365664 107 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms