Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC022493.1-201ENST00000492984 337 ntBASIC2.85□□□□□ -1.95
PRPF39Q86UA1 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.85□□□□□ -1.95
PRPF39Q86UA1 AC010424.1-201ENST00000506336 297 ntBASIC2.85□□□□□ -1.95
PRPF39Q86UA1 MTND4P2-201ENST00000507767 1203 ntBASIC2.85□□□□□ -1.95
PRPF39Q86UA1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.85□□□□□ -1.95
PRPF39Q86UA1 ELOCP31-201ENST00000540463 467 ntBASIC2.85□□□□□ -1.95
PRPF39Q86UA1 AC092325.1-201ENST00000566449 554 ntBASIC2.85□□□□□ -1.95
PRPF39Q86UA1 MIR4319-201ENST00000577285 85 ntBASIC2.85□□□□□ -1.95
PRPF39Q86UA1 MIR5692A1-201ENST00000580523 69 ntBASIC2.85□□□□□ -1.95
PRPF39Q86UA1 AL138889.2-201ENST00000603883 242 ntBASIC2.85□□□□□ -1.95
PRPF39Q86UA1 AP000787.2-201ENST00000604432 568 ntBASIC2.85□□□□□ -1.95
PRPF39Q86UA1 AC010678.1-201ENST00000614118 713 ntBASIC2.85□□□□□ -1.95
PRPF39Q86UA1 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.85□□□□□ -1.95
PRPF39Q86UA1 AL359740.1-201ENST00000624340 592 ntBASIC2.85□□□□□ -1.95
PRPF39Q86UA1 AL359854.1-201ENST00000614203 1594 ntBASIC2.85□□□□□ -1.95
PRPF39Q86UA1 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
PRPF39Q86UA1 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PRPF39Q86UA1 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
PRPF39Q86UA1 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
PRPF39Q86UA1 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.84□□□□□ -1.95
PRPF39Q86UA1 MIR1-2-201ENST00000384961 85 ntBASIC2.84□□□□□ -1.95
PRPF39Q86UA1 MIR10A-201ENST00000385043 110 ntBASIC2.84□□□□□ -1.95
PRPF39Q86UA1 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.84□□□□□ -1.95
PRPF39Q86UA1 RNU6-1328P-201ENST00000410938 106 ntBASIC2.84□□□□□ -1.95
PRPF39Q86UA1 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.84□□□□□ -1.95
PRPF39Q86UA1 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.84□□□□□ -1.95
PRPF39Q86UA1 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.84□□□□□ -1.95
PRPF39Q86UA1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.84□□□□□ -1.95
PRPF39Q86UA1 AL365338.1-201ENST00000422282 858 ntBASIC2.84□□□□□ -1.95
PRPF39Q86UA1 AC063976.3-201ENST00000426849 329 ntBASIC2.84□□□□□ -1.95
PRPF39Q86UA1 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.84□□□□□ -1.95
PRPF39Q86UA1 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.84□□□□□ -1.95
PRPF39Q86UA1 AL358934.1-201ENST00000432346 324 ntBASIC2.84□□□□□ -1.95
PRPF39Q86UA1 MTCO2P16-201ENST00000436962 677 ntBASIC2.84□□□□□ -1.95
PRPF39Q86UA1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.84□□□□□ -1.95
PRPF39Q86UA1 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.84□□□□□ -1.95
PRPF39Q86UA1 RPS15AP9-201ENST00000439856 381 ntBASIC2.84□□□□□ -1.95
PRPF39Q86UA1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.84□□□□□ -1.95
PRPF39Q86UA1 RNU7-182P-201ENST00000459009 62 ntBASIC2.84□□□□□ -1.95
PRPF39Q86UA1 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.84□□□□□ -1.95
PRPF39Q86UA1 RPL22P13-201ENST00000493291 347 ntBASIC2.84□□□□□ -1.95
PRPF39Q86UA1 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.84□□□□□ -1.95
PRPF39Q86UA1 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.84□□□□□ -1.95
PRPF39Q86UA1 AL356057.1-201ENST00000533798 831 ntBASIC2.84□□□□□ -1.95
PRPF39Q86UA1 HPRT1P3-201ENST00000539521 576 ntBASIC2.84□□□□□ -1.95
PRPF39Q86UA1 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.84□□□□□ -1.95
PRPF39Q86UA1 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.84□□□□□ -1.95
PRPF39Q86UA1 AC234778.2-201ENST00000566241 354 ntBASIC2.84□□□□□ -1.95
PRPF39Q86UA1 AL391840.1-201ENST00000571144 367 ntBASIC2.84□□□□□ -1.95
PRPF39Q86UA1 AC087045.1-201ENST00000605856 382 ntBASIC2.84□□□□□ -1.95
PRPF39Q86UA1 AC011890.2-201ENST00000613393 294 ntBASIC2.84□□□□□ -1.95
PRPF39Q86UA1 MIR7157-201ENST00000635801 60 ntBASIC2.84□□□□□ -1.95
PRPF39Q86UA1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PRPF39Q86UA1 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
PRPF39Q86UA1 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.84□□□□□ -1.96
PRPF39Q86UA1 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.84□□□□□ -1.96
PRPF39Q86UA1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.83□□□□□ -1.96
PRPF39Q86UA1 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.83□□□□□ -1.96
PRPF39Q86UA1 SNORD3E-201ENST00000362899 217 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 RNU6-181P-201ENST00000363225 107 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 RNU1-100P-201ENST00000365255 165 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 SNORD115-7-201ENST00000365306 82 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 RNU6-282P-201ENST00000365357 103 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 SNORA75B-201ENST00000384053 137 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 SNORD116-2-201ENST00000384274 95 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 Y_RNA.553-201ENST00000384670 102 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 SNORD116-6-201ENST00000384711 96 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PRPF39Q86UA1 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PRPF39Q86UA1 AC016831.2-201ENST00000417179 352 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 MTCO2P34-201ENST00000421994 607 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 AL627311.1-201ENST00000431514 115 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 AC104389.3-201ENST00000445629 235 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 AC104058.1-201ENST00000448028 297 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 AC079448.1-201ENST00000449377 373 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.83□□□□□ -1.96
PRPF39Q86UA1 RNA5SP112-201ENST00000515937 99 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 RNU6-445P-201ENST00000516949 107 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 RNA5SP503-201ENST00000517047 117 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 RNU6-430P-201ENST00000517078 107 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.83□□□□□ -1.96
PRPF39Q86UA1 AP003072.2-201ENST00000527756 676 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.83□□□□□ -1.96
PRPF39Q86UA1 AC006362.1-201ENST00000567392 174 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.83□□□□□ -1.96
PRPF39Q86UA1 MIR4528-201ENST00000577763 90 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 MIR4298-201ENST00000584380 73 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 AC073648.5-201ENST00000603502 305 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 AL021997.1-201ENST00000605757 193 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.83□□□□□ -1.96
PRPF39Q86UA1 SEPT14P19-203ENST00000633205 211 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 AC090582.1-201ENST00000636321 199 ntBASIC2.83□□□□□ -1.96
PRPF39Q86UA1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
PRPF39Q86UA1 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.83□□□□□ -1.96
PRPF39Q86UA1 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
PRPF39Q86UA1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PRPF39Q86UA1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PRPF39Q86UA1 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms