Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RPL12P50-201ENST00000603116 116 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 AL670379.4-201ENST00000605279 254 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 AC008536.2-201ENST00000607284 349 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 AC126118.1-201ENST00000607744 628 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 AC017083.3-201ENST00000609955 700 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 AL158209.2-201ENST00000619266 216 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 ADAM3A-203ENST00000461344 2157 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 RNU6-1029P-201ENST00000384109 107 ntBASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 RNU6-658P-201ENST00000384606 106 ntBASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 USP9YP6-201ENST00000413550 854 ntBASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 OR6C66P-201ENST00000414917 930 ntBASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 MYL8P-204ENST00000431574 518 ntBASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 AC104058.1-201ENST00000448028 297 ntBASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 EEF1B2P7-201ENST00000451177 676 ntBASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 RPS29P15-201ENST00000458329 171 ntBASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 GMFBP1-201ENST00000467831 427 ntBASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 AC117440.1-201ENST00000474107 571 ntBASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 TRBV1-201ENST00000476502 284 ntBASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 RPS3AP14-201ENST00000483907 780 ntBASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 BTF3P12-201ENST00000519620 469 ntBASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 AC022080.3-201ENST00000544433 482 ntBASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 AC012507.3-201ENST00000603556 477 ntBASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 AL138889.2-201ENST00000603883 242 ntBASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 AC007318.2-201ENST00000620999 243 ntBASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 AL359740.1-201ENST00000624340 592 ntBASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 AC124864.2-201ENST00000624736 186 ntBASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 MIR6863-201ENST00000636112 90 ntBASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 AC108206.1-201ENST00000570186 4159 ntBASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 AC080128.1-201ENST00000474389 1917 ntBASIC2.74□□□□□ -1.97
NUP54Q7Z3B4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 RNU6-1287P-201ENST00000362914 107 ntBASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 RNU6-1060P-201ENST00000384664 107 ntBASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 SNORA48.2-201ENST00000390926 124 ntBASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 RNU6-550P-201ENST00000391057 101 ntBASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 SNORA40C-201ENST00000391285 128 ntBASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 RN7SKP58-201ENST00000411010 305 ntBASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 AC244505.4-201ENST00000434905 287 ntBASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 SSXP5-201ENST00000443473 287 ntBASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 AL162395.1-201ENST00000457882 422 ntBASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 AC006512.1-201ENST00000468816 291 ntBASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 AC083906.5-201ENST00000503722 328 ntBASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 AC023141.11-201ENST00000508864 202 ntBASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 RNU6-720P-201ENST00000516363 108 ntBASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 RNU6-572P-201ENST00000516724 80 ntBASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 EIF1P4-201ENST00000572664 335 ntBASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 MIR4703-201ENST00000577728 79 ntBASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 AC008945.2-201ENST00000606056 604 ntBASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 AC010338.1-201ENST00000621823 717 ntBASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 U6.99-201ENST00000637524 83 ntBASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 CKAP2P1-201ENST00000555477 2049 ntBASIC2.73□□□□□ -1.97
NUP54Q7Z3B4 AC096644.4-201ENST00000563417 2912 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 Y_RNA.41-201ENST00000362646 102 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 815.8 ms