Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 ATP5F1P5-201ENST00000526403 760 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 AC005476.1-201ENST00000554427 397 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 MIR3921-201ENST00000577308 85 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 AC023575.1-201ENST00000580510 358 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 AC079587.1-201ENST00000603846 277 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 AL645944.1-201ENST00000603857 493 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 AC009779.6-201ENST00000603972 165 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 AL356218.2-201ENST00000605264 187 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 Y_RNA.65-201ENST00000362846 100 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 Y_RNA.462-201ENST00000384268 102 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 RNU6-166P-201ENST00000384371 107 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 SNORA12.2-201ENST00000391040 156 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 SNORA40C-201ENST00000391285 128 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 RPL21P75-201ENST00000396599 483 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 RPL21P28-201ENST00000401418 483 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 RNU2-14P-201ENST00000411053 191 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 FAR2P2-201ENST00000413041 594 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 AL590556.1-201ENST00000423231 483 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 AC013470.1-201ENST00000453438 462 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 RPL21P11-201ENST00000461458 483 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 RPL21P39-201ENST00000463605 483 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 KC877373.1-201ENST00000479066 408 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 AC132942.1-201ENST00000486753 483 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 AC093591.1-201ENST00000491435 481 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 RPL21P16-201ENST00000495531 483 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 MIR2114-201ENST00000516645 80 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 RNA5SP165-201ENST00000517142 115 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 AC093023.1-201ENST00000547375 507 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 AL442163.3-201ENST00000554110 156 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 AC130289.1-201ENST00000577321 73 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 MIR4277-201ENST00000578298 84 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 SNRPGP15-201ENST00000600149 222 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 AC090132.2-201ENST00000615881 347 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 uc_338.13-201ENST00000618243 179 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 AC243829.7-201ENST00000633081 225 ntBASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.09□□□□□ -1.75
RNF111Q6ZNA4 HSPA8P1-201ENST00000425843 1833 ntBASIC4.09□□□□□ -1.76
RNF111Q6ZNA4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.09□□□□□ -1.76
RNF111Q6ZNA4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RNF111Q6ZNA4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RNF111Q6ZNA4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
RNF111Q6ZNA4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 RNU6-227P-201ENST00000362865 103 ntBASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 Y_RNA.439-201ENST00000384119 94 ntBASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 Y_RNA.785-201ENST00000384290 109 ntBASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 MTCYBP2-201ENST00000407745 171 ntBASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 MIR548M-201ENST00000408260 86 ntBASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 NDUFB4P7-201ENST00000423198 363 ntBASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 AL356867.1-201ENST00000429623 299 ntBASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 RPS6P12-201ENST00000432491 726 ntBASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 ANP32BP2-201ENST00000454525 545 ntBASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 AC092798.1-201ENST00000458542 409 ntBASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 RN7SL98P-201ENST00000462271 300 ntBASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 RN7SL481P-201ENST00000477764 299 ntBASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 HMGB1P22-201ENST00000505315 124 ntBASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 SNORA81.3-201ENST00000517283 198 ntBASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 SYF2P1-201ENST00000550658 413 ntBASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 AL137100.2-201ENST00000555786 315 ntBASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 AC136932.1-201ENST00000574771 208 ntBASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 MIR4284-201ENST00000578924 81 ntBASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 MIR4300-201ENST00000581016 96 ntBASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 AC113403.1-201ENST00000604910 193 ntBASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 AC005046.1-201ENST00000608515 625 ntBASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 AP002826.1-201ENST00000608835 315 ntBASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 MIR376A1-201ENST00000616574 68 ntBASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 AL450472.1-202ENST00000637286 180 ntBASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.08□□□□□ -1.76
RNF111Q6ZNA4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 MIR335-201ENST00000362173 94 ntBASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 MIR331-201ENST00000362302 94 ntBASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 RNU6-336P-201ENST00000364891 107 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms