Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 AC004866.2-201ENST00000438285 481 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 CYCSP35-201ENST00000451978 304 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 RNU7-167P-201ENST00000459160 62 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 RPL21P10-201ENST00000463521 490 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 AC078918.1-201ENST00000498515 228 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 AC009901.1-201ENST00000506703 541 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 AC005921.1-201ENST00000510589 286 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 PTP4A1P4-201ENST00000512479 322 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 SNORA14.1-201ENST00000516113 141 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 RNU6-1213P-201ENST00000517075 94 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 IGKV2-23-201ENST00000518729 323 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 AC068657.1-201ENST00000520807 306 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 AC093012.1-202ENST00000549403 582 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 AC126177.3-201ENST00000551839 688 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 MIR3186-201ENST00000577404 85 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 AC007938.3-201ENST00000604965 623 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 AC073657.2-201ENST00000605661 303 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 HMGN2P28-201ENST00000606102 262 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 AL157817.1-201ENST00000614264 790 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 MTND5P16-201ENST00000460269 1703 ntBASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 RNU6-1115P-201ENST00000362490 106 ntBASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 Y_RNA.148-201ENST00000363557 117 ntBASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 RNU6-601P-201ENST00000384540 107 ntBASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 RNU6-1105P-201ENST00000384774 107 ntBASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 RNU6-328P-201ENST00000390887 106 ntBASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 RNU2-43P-201ENST00000410306 190 ntBASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 Y_RNA.646-201ENST00000410980 101 ntBASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 RPLP0P7-201ENST00000416050 667 ntBASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 EI24P1-201ENST00000416584 867 ntBASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 RPL7P10-201ENST00000417407 739 ntBASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 AL139396.1-201ENST00000421137 167 ntBASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 AC005300.1-201ENST00000428401 373 ntBASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 Z75741.1-201ENST00000446793 314 ntBASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 Y_RNA.653-201ENST00000459091 95 ntBASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 TBCAP3-201ENST00000512475 312 ntBASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 RPL39P5-202ENST00000512505 151 ntBASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 RNA5SP217-201ENST00000515959 91 ntBASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 Y_RNA.689-201ENST00000516589 107 ntBASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 RNA5SP309-201ENST00000516670 106 ntBASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 AP004242.1-201ENST00000533701 349 ntBASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 AC174048.1-201ENST00000603389 144 ntBASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 AL138889.2-201ENST00000603883 242 ntBASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 AC106900.2-201ENST00000604994 317 ntBASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 AL670379.4-201ENST00000605279 254 ntBASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.17□□□□□ -1.9
ZNF549Q6P9A3 MTND5P10-201ENST00000603719 1809 ntBASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 RNU6-639P-201ENST00000384074 107 ntBASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 RNU6-393P-201ENST00000384475 107 ntBASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 CISD1P1-201ENST00000393907 327 ntBASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 AL357075.1-201ENST00000404107 726 ntBASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 RPL32P35-201ENST00000415214 394 ntBASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 AC018865.2-201ENST00000423631 129 ntBASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 AL590632.1-201ENST00000424289 371 ntBASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 NEFMP1-201ENST00000443423 1006 ntBASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 HMGN2P7-201ENST00000456186 273 ntBASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 RPL30P15-201ENST00000457129 321 ntBASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 AC091153.1-201ENST00000466297 402 ntBASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 AL049830.2-201ENST00000480072 201 ntBASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 AC005951.2-201ENST00000576282 495 ntBASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms