Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 SNORD62.1-201ENST00000362541 86 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 RNU6-78P-201ENST00000362897 107 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 RNU6-942P-201ENST00000363002 107 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 RNU1-100P-201ENST00000365255 165 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 RNU6-213P-201ENST00000384051 104 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 Y_RNA.482-201ENST00000384377 111 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 HLFP1-201ENST00000402375 499 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 RNU6-293P-201ENST00000411259 106 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 AC023141.4-201ENST00000412031 328 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 AL117339.3-201ENST00000418733 162 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 AL139247.1-201ENST00000422768 325 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 RPS15AP5-201ENST00000436276 388 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 TBCAP1-201ENST00000436520 327 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 RNU6-1037P-201ENST00000459571 107 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 AC069499.1-201ENST00000489433 509 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 RN7SL323P-201ENST00000494712 295 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 AC116337.1-201ENST00000509680 687 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 RNU6-377P-201ENST00000515965 102 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 RNU6-581P-201ENST00000516214 105 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 RNU1-54P-201ENST00000517181 120 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 HPRT1P3-201ENST00000539521 576 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 AC020895.1-201ENST00000595362 272 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 AL160281.1-201ENST00000605307 311 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 AC011890.2-201ENST00000613393 294 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 AC004852.3-201ENST00000614131 326 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 AL354798.1-201ENST00000622505 329 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 AC138627.2-201ENST00000624202 601 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 U4.7-201ENST00000638126 106 ntBASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC144NLQ6NUI1 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 AL021368.2-201ENST00000606125 5352 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 RNU6-593P-201ENST00000364716 112 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 SNORA14A-201ENST00000364773 135 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 RNU6-1280P-201ENST00000365211 107 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 RNU6-1297P-201ENST00000384415 104 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 RNU6-601P-201ENST00000384540 107 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 MIR591-201ENST00000385290 95 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 MIR1193-201ENST00000408109 78 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 AL030996.1-201ENST00000411430 235 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 RPS15AP10-201ENST00000432472 382 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 AC236972.2-201ENST00000434979 310 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 HIGD1AP11-201ENST00000438361 280 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 NIPA2P5-201ENST00000452282 464 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 AC013470.1-201ENST00000453438 462 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 AC006026.2-201ENST00000457376 180 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 SNORA43.2-201ENST00000516652 128 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 SNORA31.21-201ENST00000517180 77 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 TRMT10BP1-201ENST00000519377 943 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 AC006199.1-201ENST00000548728 219 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 AL163153.1-201ENST00000554223 283 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 AC103996.1-201ENST00000555468 102 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 AL121821.2-201ENST00000556081 394 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 AL020997.2-201ENST00000602607 184 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 AC024153.1-201ENST00000603103 365 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 MIR486-1-201ENST00000612171 68 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 AC135507.2-201ENST00000612443 309 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 AL161423.1-201ENST00000613700 262 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 AC244517.12-201ENST00000623581 663 ntBASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC144NLQ6NUI1 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC144NLQ6NUI1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CCDC144NLQ6NUI1 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms