Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 AL669831.1-202ENST00000428504 417 ntBASIC0.08□□□□□ -2.4
RNF213Q63HN8 GTF2IP13-201ENST00000438487 386 ntBASIC0.08□□□□□ -2.4
RNF213Q63HN8 AC133963.2-201ENST00000513686 578 ntBASIC0.08□□□□□ -2.4
RNF213Q63HN8 HMGB1P14-201ENST00000557424 591 ntBASIC0.08□□□□□ -2.4
RNF213Q63HN8 AL121992.2-201ENST00000606262 256 ntBASIC0.08□□□□□ -2.4
RNF213Q63HN8 AC110079.1-202ENST00000635213 138 ntBASIC0.08□□□□□ -2.4
RNF213Q63HN8 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC0.08□□□□□ -2.4
RNF213Q63HN8 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.07□□□□□ -2.4
RNF213Q63HN8 RNU4-42P-201ENST00000364738 142 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.07□□□□□ -2.4
RNF213Q63HN8 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.07□□□□□ -2.4
RNF213Q63HN8 AC079448.1-201ENST00000449377 373 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 COX6CP6-201ENST00000490840 228 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 PSMC1P5-201ENST00000512850 177 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.07□□□□□ -2.4
RNF213Q63HN8 AC004584.2-201ENST00000570407 410 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 AC018618.2-201ENST00000604770 446 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 SNORD26-201ENST00000384147 75 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
RNF213Q63HN8 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.07□□□□□ -2.4
RNF213Q63HN8 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.07□□□□□ -2.4
RNF213Q63HN8 RNU6-1191P-201ENST00000516799 107 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 HSBP1P1-201ENST00000555205 166 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 AC105224.1-201ENST00000587055 421 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 AC018462.2-201ENST00000605375 395 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 uc_338.34-201ENST00000617467 174 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.07□□□□□ -2.4
RNF213Q63HN8 RNU6-799P-201ENST00000363567 107 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 BPY2DP-201ENST00000422208 265 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 AL356867.1-201ENST00000429623 299 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 AC010469.2-201ENST00000496412 480 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 RN7SKP12-201ENST00000516275 143 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.07□□□□□ -2.4
RNF213Q63HN8 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.07□□□□□ -2.4
RNF213Q63HN8 MIR4661-201ENST00000582720 75 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.07□□□□□ -2.4
RNF213Q63HN8 AC103705.1-201ENST00000619013 241 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 MIR411-201ENST00000362239 96 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 MIR29B2-201ENST00000385055 81 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 SNORA12.1-201ENST00000390873 148 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 AC244505.3-201ENST00000454598 187 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 RNU6-322P-201ENST00000516010 103 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 AP001269.3-201ENST00000588718 329 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 AC022202.1-201ENST00000613515 211 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 RMST_7.1-201ENST00000621935 268 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 AP000943.4-201ENST00000622912 357 ntBASIC0.07□□□□□ -2.4
RNF213Q63HN8 RNU4-48P-201ENST00000365559 182 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.06□□□□□ -2.4
RNF213Q63HN8 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.06□□□□□ -2.4
RNF213Q63HN8 NDUFB4P7-201ENST00000423198 363 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.06□□□□□ -2.4
RNF213Q63HN8 AC245047.4-201ENST00000433189 144 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 AC245047.7-201ENST00000440265 293 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.06□□□□□ -2.4
RNF213Q63HN8 RPS26P45-201ENST00000471748 340 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.06□□□□□ -2.4
RNF213Q63HN8 AC107953.1-201ENST00000522216 297 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 AC084757.1-201ENST00000559987 490 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 MTCO3P24-201ENST00000572729 782 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 AC098614.4-201ENST00000607601 462 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 AC006065.5-201ENST00000623427 349 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 Y_RNA.480-201ENST00000384364 102 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 MIR147B-201ENST00000390185 80 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.06□□□□□ -2.4
RNF213Q63HN8 DDX3P2-201ENST00000446138 111 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 OFD1P3Y-201ENST00000453312 783 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 AC069277.2-201ENST00000454211 432 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 RPS29P27-201ENST00000463711 170 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 AC091959.1-201ENST00000495857 238 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
RNF213Q63HN8 AC147055.4-201ENST00000504399 745 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 RNU6-980P-201ENST00000516925 103 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.06□□□□□ -2.4
RNF213Q63HN8 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.06□□□□□ -2.4
RNF213Q63HN8 RNU1-72P-201ENST00000362976 153 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 RNU6-1327P-201ENST00000365302 105 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 RFESDP1-201ENST00000422350 461 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 SCARNA16.2-201ENST00000516520 172 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 MIR3165-201ENST00000579874 75 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC0.06□□□□□ -2.4
RNF213Q63HN8 AL021997.1-201ENST00000605757 193 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 AC006249.1-201ENST00000621223 471 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 SNORA16.2-201ENST00000390991 127 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 SNORD126-201ENST00000459475 77 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 AC010409.1-201ENST00000487382 476 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.06□□□□□ -2.4
RNF213Q63HN8 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.06□□□□□ -2.4
RNF213Q63HN8 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.06□□□□□ -2.4
RNF213Q63HN8 AL590229.1-201ENST00000603497 542 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.06□□□□□ -2.4
RNF213Q63HN8 MIR371B-201ENST00000638082 66 ntBASIC0.06□□□□□ -2.4
RNF213Q63HN8 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
RNF213Q63HN8 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
RNF213Q63HN8 Y_RNA.311-201ENST00000365068 96 ntBASIC0.05□□□□□ -2.4
RNF213Q63HN8 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.05□□□□□ -2.4
RNF213Q63HN8 SNORD23.1-201ENST00000408212 104 ntBASIC0.05□□□□□ -2.4
RNF213Q63HN8 PTP4A1P1-201ENST00000420539 515 ntBASIC0.05□□□□□ -2.4
RNF213Q63HN8 AC099677.1-201ENST00000420575 175 ntBASIC0.05□□□□□ -2.4
RNF213Q63HN8 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.05□□□□□ -2.4
RNF213Q63HN8 MIR3678-201ENST00000578455 94 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms