Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.15□□□□□ -2.39
UBR4Q5T4S7 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.15□□□□□ -2.39
UBR4Q5T4S7 RPL39P29-201ENST00000447779 157 ntBASIC0.15□□□□□ -2.39
UBR4Q5T4S7 AC107214.2-201ENST00000608204 634 ntBASIC0.15□□□□□ -2.39
UBR4Q5T4S7 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.15□□□□□ -2.39
UBR4Q5T4S7 SNORA51.2-201ENST00000364595 132 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 RNU6-1320P-201ENST00000390838 107 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 RNU6-1269P-201ENST00000391139 107 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.14□□□□□ -2.39
UBR4Q5T4S7 RNU6-599P-201ENST00000459383 107 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 RNU6-1193P-201ENST00000459461 107 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 EIF4EP3-201ENST00000498782 656 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 AC104417.1-201ENST00000523974 751 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 SUB1P1-201ENST00000524415 382 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 AP004371.1-201ENST00000525240 214 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 EIF4EP5-201ENST00000528228 640 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 AP001269.3-201ENST00000588718 329 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 AP001485.1-201ENST00000604799 199 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 AL133507.1-201ENST00000605269 557 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 FTX_3.1-201ENST00000610451 147 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 RNU6-368P-201ENST00000620928 107 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 RNU6-538P-201ENST00000622329 107 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.14□□□□□ -2.39
UBR4Q5T4S7 CFTRP2-201ENST00000634304 199 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
UBR4Q5T4S7 RFESDP1-201ENST00000422350 461 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 OFD1P3Y-201ENST00000453312 783 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.14□□□□□ -2.39
UBR4Q5T4S7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.14□□□□□ -2.39
UBR4Q5T4S7 HMGB1P14-201ENST00000557424 591 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 AC023824.2-201ENST00000566185 400 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.14□□□□□ -2.39
UBR4Q5T4S7 AL109918.3-201ENST00000603072 338 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.14□□□□□ -2.39
UBR4Q5T4S7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC0.14□□□□□ -2.39
UBR4Q5T4S7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC0.14□□□□□ -2.39
UBR4Q5T4S7 AC097493.1-201ENST00000463958 372 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.14□□□□□ -2.39
UBR4Q5T4S7 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC0.14□□□□□ -2.39
UBR4Q5T4S7 SCARNA17-201ENST00000516183 144 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC0.14□□□□□ -2.39
UBR4Q5T4S7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.14□□□□□ -2.39
UBR4Q5T4S7 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC0.14□□□□□ -2.39
UBR4Q5T4S7 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC0.14□□□□□ -2.39
UBR4Q5T4S7 MIR10B-201ENST00000385011 110 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 RNA5SP492-201ENST00000411330 114 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 AL606490.4-201ENST00000423117 127 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 AC079448.1-201ENST00000449377 373 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.14□□□□□ -2.39
UBR4Q5T4S7 AC087477.1-201ENST00000465747 340 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC0.14□□□□□ -2.39
UBR4Q5T4S7 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.14□□□□□ -2.39
UBR4Q5T4S7 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC0.14□□□□□ -2.39
UBR4Q5T4S7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.14□□□□□ -2.39
UBR4Q5T4S7 AC106800.4-201ENST00000614905 153 ntBASIC0.14□□□□□ -2.39
UBR4Q5T4S7 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
UBR4Q5T4S7 AL356131.1-201ENST00000405826 414 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 AL591034.1-201ENST00000407447 340 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 AC096533.1-201ENST00000411645 353 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 XKRYP1-201ENST00000423438 492 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 XKRYP2-201ENST00000432915 492 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC0.13□□□□□ -2.39
UBR4Q5T4S7 MTCO3P24-201ENST00000572729 782 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.13□□□□□ -2.39
UBR4Q5T4S7 AC016925.2-201ENST00000605108 242 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.13□□□□□ -2.39
UBR4Q5T4S7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
UBR4Q5T4S7 MIR934-201ENST00000401241 83 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 RNU4-65P-201ENST00000410473 140 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 PIGPP2-201ENST00000411569 458 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 AC109327.2-201ENST00000448339 378 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
UBR4Q5T4S7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.13□□□□□ -2.39
UBR4Q5T4S7 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.13□□□□□ -2.39
UBR4Q5T4S7 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC0.13□□□□□ -2.39
UBR4Q5T4S7 AC003001.2-201ENST00000616294 831 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 MIR8065-201ENST00000620577 100 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 AC006065.5-201ENST00000623427 349 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 RNU6-529P-201ENST00000363383 104 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 MIR520F-201ENST00000384824 87 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 PTP4A1P1-201ENST00000420539 515 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.13□□□□□ -2.39
UBR4Q5T4S7 RAB9AP5-201ENST00000437794 597 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC0.13□□□□□ -2.39
UBR4Q5T4S7 DDX3P2-201ENST00000446138 111 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.13□□□□□ -2.39
UBR4Q5T4S7 RPL26P26-201ENST00000480251 434 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.13□□□□□ -2.39
UBR4Q5T4S7 AC004584.2-201ENST00000570407 410 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 MIR4529-201ENST00000578110 78 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC0.13□□□□□ -2.39
UBR4Q5T4S7 AC245884.12-201ENST00000615364 59 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 AC073349.3-201ENST00000617616 186 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC0.13□□□□□ -2.39
UBR4Q5T4S7 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
UBR4Q5T4S7 RNU4-48P-201ENST00000365559 182 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.13□□□□□ -2.39
UBR4Q5T4S7 SNRPGP15-201ENST00000600149 222 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 AL589935.2-201ENST00000616471 1231 ntBASIC0.13□□□□□ -2.39
UBR4Q5T4S7 ENSAP3-201ENST00000312710 333 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms