Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.58□□□□□ -1.52
VARS2Q5ST30 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VARS2Q5ST30 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VARS2Q5ST30 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VARS2Q5ST30 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VARS2Q5ST30 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
VARS2Q5ST30 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC5.57□□□□□ -1.52
VARS2Q5ST30 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
VARS2Q5ST30 AL034549.2-201ENST00000618285 3373 ntBASIC5.57□□□□□ -1.52
VARS2Q5ST30 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VARS2Q5ST30 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC5.57□□□□□ -1.52
VARS2Q5ST30 MIR302B-201ENST00000362188 73 ntBASIC5.57□□□□□ -1.52
VARS2Q5ST30 RNY1P1-201ENST00000364372 112 ntBASIC5.57□□□□□ -1.52
VARS2Q5ST30 RNU6-24P-201ENST00000384440 107 ntBASIC5.57□□□□□ -1.52
VARS2Q5ST30 AC099670.2-201ENST00000435130 321 ntBASIC5.57□□□□□ -1.52
VARS2Q5ST30 RPS29P10-201ENST00000439197 166 ntBASIC5.57□□□□□ -1.52
VARS2Q5ST30 AC006026.2-201ENST00000457376 180 ntBASIC5.57□□□□□ -1.52
VARS2Q5ST30 AC007215.1-201ENST00000464893 276 ntBASIC5.57□□□□□ -1.52
VARS2Q5ST30 AC097484.1-201ENST00000471148 389 ntBASIC5.57□□□□□ -1.52
VARS2Q5ST30 AC108738.1-201ENST00000603703 237 ntBASIC5.57□□□□□ -1.52
VARS2Q5ST30 AL162431.4-201ENST00000604674 411 ntBASIC5.57□□□□□ -1.52
VARS2Q5ST30 AL137843.1-201ENST00000605078 385 ntBASIC5.57□□□□□ -1.52
VARS2Q5ST30 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VARS2Q5ST30 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VARS2Q5ST30 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VARS2Q5ST30 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VARS2Q5ST30 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
VARS2Q5ST30 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VARS2Q5ST30 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VARS2Q5ST30 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VARS2Q5ST30 AC004656.1-201ENST00000568479 4951 ntBASIC5.56□□□□□ -1.52
VARS2Q5ST30 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VARS2Q5ST30 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
VARS2Q5ST30 RNU1-62P-201ENST00000362599 164 ntBASIC5.56□□□□□ -1.52
VARS2Q5ST30 RNU6-776P-201ENST00000364403 104 ntBASIC5.56□□□□□ -1.52
VARS2Q5ST30 RNA5SP90-201ENST00000364801 99 ntBASIC5.56□□□□□ -1.52
VARS2Q5ST30 RNU6-1022P-201ENST00000365049 104 ntBASIC5.56□□□□□ -1.52
VARS2Q5ST30 SNORA62-201ENST00000365493 153 ntBASIC5.56□□□□□ -1.52
VARS2Q5ST30 SNORA51.8-201ENST00000384234 132 ntBASIC5.56□□□□□ -1.52
VARS2Q5ST30 MIR23A-201ENST00000385245 73 ntBASIC5.56□□□□□ -1.52
VARS2Q5ST30 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.56□□□□□ -1.52
VARS2Q5ST30 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.56□□□□□ -1.52
VARS2Q5ST30 RPS23P7-201ENST00000466210 444 ntBASIC5.56□□□□□ -1.52
VARS2Q5ST30 RN7SL197P-201ENST00000466981 299 ntBASIC5.56□□□□□ -1.52
VARS2Q5ST30 AC091826.1-201ENST00000514065 313 ntBASIC5.56□□□□□ -1.52
VARS2Q5ST30 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.56□□□□□ -1.52
VARS2Q5ST30 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
VARS2Q5ST30 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
VARS2Q5ST30 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.56□□□□□ -1.52
VARS2Q5ST30 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
VARS2Q5ST30 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.56□□□□□ -1.52
VARS2Q5ST30 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VARS2Q5ST30 ASNSP1-201ENST00000518311 1939 ntBASIC5.56□□□□□ -1.52
VARS2Q5ST30 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
VARS2Q5ST30 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
VARS2Q5ST30 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.56□□□□□ -1.52
VARS2Q5ST30 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.56□□□□□ -1.52
VARS2Q5ST30 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
VARS2Q5ST30 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
VARS2Q5ST30 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VARS2Q5ST30 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.55□□□□□ -1.52
VARS2Q5ST30 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VARS2Q5ST30 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.55□□□□□ -1.52
VARS2Q5ST30 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.55□□□□□ -1.52
VARS2Q5ST30 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
VARS2Q5ST30 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VARS2Q5ST30 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
VARS2Q5ST30 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.55□□□□□ -1.52
VARS2Q5ST30 Y_RNA.93-201ENST00000363066 109 ntBASIC5.55□□□□□ -1.52
VARS2Q5ST30 RNU6-799P-201ENST00000363567 107 ntBASIC5.55□□□□□ -1.52
VARS2Q5ST30 Y_RNA.243-201ENST00000364481 109 ntBASIC5.55□□□□□ -1.52
VARS2Q5ST30 Y_RNA.245-201ENST00000364493 95 ntBASIC5.55□□□□□ -1.52
VARS2Q5ST30 RNU6-484P-201ENST00000384016 107 ntBASIC5.55□□□□□ -1.52
VARS2Q5ST30 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
VARS2Q5ST30 U3.37-201ENST00000408528 213 ntBASIC5.55□□□□□ -1.52
VARS2Q5ST30 AL691449.1-201ENST00000426570 421 ntBASIC5.55□□□□□ -1.52
VARS2Q5ST30 ATP6V0E1P4-201ENST00000427294 242 ntBASIC5.55□□□□□ -1.52
VARS2Q5ST30 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.55□□□□□ -1.52
VARS2Q5ST30 AC090515.1-201ENST00000465295 476 ntBASIC5.55□□□□□ -1.52
VARS2Q5ST30 COX6CP6-201ENST00000490840 228 ntBASIC5.55□□□□□ -1.52
VARS2Q5ST30 AC018442.3-201ENST00000523025 183 ntBASIC5.55□□□□□ -1.52
VARS2Q5ST30 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.55□□□□□ -1.52
VARS2Q5ST30 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.55□□□□□ -1.52
VARS2Q5ST30 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.55□□□□□ -1.52
VARS2Q5ST30 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
VARS2Q5ST30 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VARS2Q5ST30 OR9K1P-202ENST00000641111 3217 ntBASIC5.55□□□□□ -1.52
VARS2Q5ST30 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VARS2Q5ST30 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
VARS2Q5ST30 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
VARS2Q5ST30 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
VARS2Q5ST30 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
VARS2Q5ST30 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
VARS2Q5ST30 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VARS2Q5ST30 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.54□□□□□ -1.52
VARS2Q5ST30 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.54□□□□□ -1.52
VARS2Q5ST30 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
VARS2Q5ST30 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VARS2Q5ST30 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VARS2Q5ST30 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms